Evidence map›Paper›PMID 35377798›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2022

A generalist-specialist trade-off between switchgrass cytotypes impacts climate adaptation and geographic range.

Joseph D Napier, Paul P Grabowski, John T Lovell, Jason Bonnette, Sujan Mamidi, Maria Jose Gomez-Hughes, Acer VanWallendael, Xiaoyu Weng, Lori H Handley, Min K Kim and 16 more

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
5.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Global gradients in the distribution of animal polyploids.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  10. A generalist-specialist trade-off between switchgrass cytotypes impacts climate adaptation and geographic range.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

26 authors at 10 institutions in 1 country.

Joseph D NapierDepartment of Integrative Biology, University of Texas at Austin, Austin, TX 78712.ORCID 0000-0002-8557-5086
Paul P GrabowskiGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL 35806.ORCID 0000-0002-4372-0847
John T LovellGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL 35806.
Jason BonnetteDepartment of Integrative Biology, University of Texas at Austin, Austin, TX 78712.
Sujan MamidiGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL 35806.ORCID 0000-0002-3837-6121
Maria Jose Gomez-HughesDepartment of Integrative Biology, University of Texas at Austin, Austin, TX 78712.ORCID 0000-0002-0256-0971
Acer VanWallendaelDepartment of Plant Biology, Michigan State University, East Lansing, MI 48824.
Xiaoyu WengDepartment of Integrative Biology, University of Texas at Austin, Austin, TX 78712.
Lori H HandleyGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL 35806.
Min K KimGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL 35806.
Arvid R BoeDepartment of Agronomy, Horticulture, and Plant Science, South Dakota State University, Brookings, SD 57007.
Philip A FayGrassland, Soil, and Water Research Laboratory, US Department of Agriculture-Agricultural Research Service, Temple, TX 76502.ORCID 0000-0002-8291-6316
Felix B FritschiDivision of Plant Science and Technology, University of Missouri, Columbia, MO 65211.ORCID 0000-0003-0825-6855
Julie D JastrowEnvironmental Science Division, Argonne National Laboratory, Lemont, IL 60439.ORCID 0000-0001-7069-4560
John Lloyd-ReilleyKika de la Garza Plant Materials Center, US Department of Agriculture-Natural Resources Conservation Service, Kingsville, TX 78363.
David B LowryDepartment of Plant Biology, Michigan State University, East Lansing, MI 48824.ORCID 0000-0002-8182-1059
Roser MatamalaEnvironmental Science Division, Argonne National Laboratory, Lemont, IL 60439.ORCID 0000-0001-5552-9807
Robert B MitchellWheat, Sorghum, and Forage Research Unit, US Department of Agriculture-Agricultural Research Service, Lincoln, NE 68583.
Francis M RouquetteTexas A&M AgriLife Research and Extension Center, Texas A&M University, Overton, TX 75684.ORCID 0000-0001-5526-9793
Yanqi WuDepartment of Plant and Soil Sciences, Oklahoma State University, Stillwater, OK 74078.ORCID 0000-0003-0802-6881
Jenell WebberGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL 35806.
Teresa JonesGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL 35806.
Kerrie BarryDepartment of Energy Joint Genome Institute, Lawrence Berkeley National Laboratory, Berkeley, CA 94720.
Jane GrimwoodGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL 35806.ORCID 0000-0002-8356-8325
Jeremy SchmutzGenome Sequencing Center, HudsonAlpha Institute for Biotechnology, Huntsville, AL 35806.ORCID 0000-0001-8062-9172
Thomas E JuengerDepartment of Integrative Biology, University of Texas at Austin, Austin, TX 78712.ORCID 0000-0001-9550-9288
HudsonAlpha Institute for Biotechnology · USThe University of Texas at Austin · USAgricultural Research Service · USArgonne National Laboratory · USLawrence Berkeley National Laboratory · USMichigan State University · USNatural Resources Conservation Service · USOklahoma State University · USSouth Dakota State University · USUniversity of Missouri · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Polyploidy results from whole-genome duplication and is a unique form of heritable variation with pronounced evolutionary implications. Different ploidy levels, or cytotypes, can exist within a single species, and such systems provide an opportunity to assess how ploidy variation alters phenotypic novelty, adaptability, and fitness, which can, in turn, drive the development of unique ecological niches that promote the coexistence of multiple cytotypes. Switchgrass, Panicum virgatum, is a widespread, perennial C4 grass in North America with multiple naturally occurring cytotypes, primarily tetraploids (4×) and octoploids (8×). Using a combination of genomic, quantitative genetic, landscape, and niche modeling approaches, we detect divergent levels of genetic admixture, evidence of niche differentiation, and differential environmental sensitivity between switchgrass cytotypes. Taken together, these findings support a generalist (8×)–specialist (4×) trade-off. Our results indicate that the 8× represent a unique combination of genetic variation that has allowed the expansion of switchgrass’ ecological niche and thus putatively represents a valuable breeding resource.

Indexed as

AcclimatizationPanicumPolyploidyGenetic VariationTetraploidycytotypesoctoploidPanicum virgatum

Identifiers

PMID35377798
PMCPMC9169841
OpenAlexW4223906914

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.