Evidence map›Paper›PMID 35377486›Full record

ArticleThe New phytologist2022

A new approach to zip-lignin: 3,4-dihydroxybenzoate is compatible with lignification.

Faride Unda, Yaseen Mottiar, Elizabeth L Mahon, Steven D Karlen, Kwang Ho Kim, Dominique Loqué, Aymerick Eudes, John Ralph, Shawn D Mansfield

Open access · hybridAbstract read
In one paragraph

Article in The New phytologist, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.9field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Plant engineering: advances, bottlenecks, and promise.The Plant journal : for cell and molecular biology · 2025
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Enhancing monolignol ferulate conjugate levels in poplar lignin via OsFMT1.Biotechnology for biofuels and bioproducts · 2024
    Article
  12. EngineeringApplied and environmental microbiology · 2024
    Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Faride UndaDepartment of Wood Science, University of British Columbia, 2424 Main Mall, Vancouver, BC, V6T 1Z4, Canada.ORCID 0000-0003-0842-8741
Yaseen MottiarDepartment of Wood Science, University of British Columbia, 2424 Main Mall, Vancouver, BC, V6T 1Z4, Canada.ORCID 0000-0002-4106-6159
Elizabeth L MahonDepartment of Wood Science, University of British Columbia, 2424 Main Mall, Vancouver, BC, V6T 1Z4, Canada.ORCID 0000-0002-5177-7018
Steven D KarlenDepartment of Energy, Great Lakes Bioenergy Research Center, Wisconsin Energy Institute, University of Wisconsin-Madison, 1552 University Avenue, Madison, WI, 53726, USA.ORCID 0000-0002-2044-8895
Kwang Ho KimDepartment of Wood Science, University of British Columbia, 2424 Main Mall, Vancouver, BC, V6T 1Z4, Canada.ORCID 0000-0003-3943-1927
Dominique LoquéJoint BioEnergy Institute, 5885 Hollis Street, Emeryville, CA, 94608, USA.ORCID 0000-0002-2060-6611
Aymerick EudesJoint BioEnergy Institute, 5885 Hollis Street, Emeryville, CA, 94608, USA.ORCID 0000-0002-1387-6111
John RalphDepartment of Energy, Great Lakes Bioenergy Research Center, Wisconsin Energy Institute, University of Wisconsin-Madison, 1552 University Avenue, Madison, WI, 53726, USA.ORCID 0000-0002-6093-4521
Shawn D MansfieldDepartment of Wood Science, University of British Columbia, 2424 Main Mall, Vancouver, BC, V6T 1Z4, Canada.ORCID 0000-0002-0175-554X
University of Wisconsin–Madison · USJoint BioEnergy Institute · USLawrence Berkeley National Laboratory · USUniversity of British Columbia · CA

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Renewed interests in the development of bioenergy, biochemicals, and biomaterials have elicited new strategies for engineering the lignin of biomass feedstock plants. This study shows, for the first time, that 3,4-dihydroxybenzoate (DHB) is compatible with the radical coupling reactions that assemble polymeric lignin in plants. We introduced a bacterial 3-dehydroshikimate dehydratase into hybrid poplar (Populus alba × grandidentata) to divert carbon flux away from the shikimate pathway, which lies upstream of lignin biosynthesis. Transgenic poplar wood had up to 33% less lignin with p-hydroxyphenyl units comprising as much as 10% of the lignin. Mild alkaline hydrolysis of transgenic wood released fewer ester-linked p-hydroxybenzoate groups than control trees, and revealed the novel incorporation of cell-wall-bound DHB, as well as glycosides of 3,4-dihydroxybenzoic acid (DHBA). Two-dimensional nuclear magnetic resonance (2D-NMR) analysis uncovered DHBA-derived benzodioxane structures suggesting that DHB moieties were integrated into the lignin polymer backbone. In addition, up to 40% more glucose was released from transgenic wood following ionic liquid pretreatment and enzymatic hydrolysis. This work highlights the potential of diverting carbon flux from the shikimate pathway for lignin engineering and describes a new type of 'zip-lignin' derived from the incorporation of DHB into poplar lignin.

Indexed as

LigninPopulusHydroxybenzoatesPlants, Genetically ModifiedWood3,4-dihydroxybenzoateHydroxybenzoatesLigninacylated monolignolsbiomass feedstock engineeringlignin valorizationpoplar treesPopulus alba × grandidentatazip-lignin

Identifiers

PMID35377486
PMCPMC9325543
OpenAlexW4226078907

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.