Evidence map›Paper›PMID 35373173›Full record

ArticleThe Lancet regional health. Europe2022

Artificial intelligence to predict West Nile virus outbreaks with eco-climatic drivers.

Zia Farooq, Joacim Rocklöv, Jonas Wallin, Najmeh Abiri, Maquines Odhiambo Sewe, Henrik Sjödin, Jan C Semenza

Abstract read
In one paragraph

Article in The Lancet regional health. Europe, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 73 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
73citing papers in PubMed, 4 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

73 citing papers in PubMed, 4 syntheses or guidelines pooled it.

  1. Modelling the risk of West Nile virus infection in seven European countries from published serological and case notification data, 2008 to 2022.Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2026
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  3. Rehabilitation approaches in West Nile Virus survivors: a systematic review.European journal of physical and rehabilitation medicine · 2024
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  12. Predicting West Nile virus circulation: a 20-year spatiotemporal study in humans and animals in Spain, 2003 to 2022.Euro surveillance : bulletin Europeen sur les maladies transmissibles = European communicable disease bulletin · 2026
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13 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Zia FarooqDepartment of public health and clinical medicine, Section of sustainable health, Umeå university, Sweden.
Joacim RocklövHeidelberg institute of global health and Interdisciplinary center for scientific computing, University of Heidelberg, Im Neuenheimer Feld 205, Heidelberg 69120, Germany.
Jonas WallinDepartment of statistics, Lund university, Sweden.
Najmeh AbiriDepartment of statistics, Lund university, Sweden.
Maquines Odhiambo SeweDepartment of public health and clinical medicine, Section of sustainable health, Umeå university, Sweden.
Henrik SjödinDepartment of public health and clinical medicine, Section of sustainable health, Umeå university, Sweden.
Jan C SemenzaHeidelberg institute of global health and Interdisciplinary center for scientific computing, University of Heidelberg, Im Neuenheimer Feld 205, Heidelberg 69120, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: In Europe, the frequency, intensity, and geographic range of West Nile virus (WNV)-outbreaks have increased over the past decade, with a 7.2-fold increase in 2018 compared to 2017, and a markedly expanded geographic area compared to 2010. The reasons for this increase and range expansion remain largely unknown due to the complexity of the transmission pathways and underlying disease drivers. In a first, we use advanced artificial intelligence to disentangle the contribution of eco-climatic drivers to WNV-outbreaks across Europe using decade-long (2010-2019) data at high spatial resolution. Methods: We use a high-performance machine learning classifier, XGBoost (eXtreme gradient boosting) combined with state-of-the-art XAI (eXplainable artificial intelligence) methodology to describe the predictive ability and contribution of different drivers of the emergence and transmission of WNV-outbreaks in Europe, respectively. Findings: Our model, trained on 2010-2017 data achieved an AUC (area under the receiver operating characteristic curve) score of 0.97 and 0.93 when tested with 2018 and 2019 data, respectively, showing a high discriminatory power to classify a WNV-endemic area. Overall, positive summer/spring temperatures anomalies, lower water availability index (NDWI), and drier winter conditions were found to be the main determinants of WNV-outbreaks across Europe. The climate trends of the preceding year in combination with eco-climatic predictors of the first half of the year provided a robust predictive ability of the entire transmission season ahead of time. For the extraordinary 2018 outbreak year, relatively higher spring temperatures and the abundance of Interpretation: Our AI-based framework can be deployed to trigger rapid and timely alerts for active surveillance and vector control measures in order to intercept an imminent WNV-outbreak in Europe. Funding: The work was partially funded by the Swedish Research Council FORMAS for the project ARBOPREVENT (grant agreement 2018-05973).

Indexed as

Climate adaptationCulex vectorsEarly warning systemsEmerging infectious diseaseEuropeforecastingOutbreaks managementPreparednessSHAPWest Nile virusXGBoost

Identifiers

PMID35373173
PMCPMC8971633

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.