Evidence map›Paper›PMID 35371346›Full record

ArticleDisease markers2022

5-Methylcytosine-Related Long Noncoding RNAs Are Potential Biomarkers to Predict Overall Survival and Regulate Tumor-Immune Environment in Patients with Bladder Cancer.

Zhuoyuan Li, Siyu Wang, Yuxian Chen, Yaozhou Huang, Tianping Li

Open access · hybridAbstract read
In one paragraph

Article in Disease markers, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Review
  6. Article
  7. Vital roles of mFrontiers in immunology · 2023
    Review
  8. Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Zhuoyuan LiPharmaceutical Department of Sichuan University West China Hospital, Chengdu, Sichuan 610041, China.ORCID https://orcid.org/0000-0002-1016-6202
Siyu WangChina Pharmaceutical University, #639 Longmian Avenue, Jiangning District, Nanjing, Jiangsu 211198, China.ORCID https://orcid.org/0000-0001-6845-9780
Yuxian ChenPharmaceutical Department of Sichuan University West China Hospital, Chengdu, Sichuan 610041, China.ORCID https://orcid.org/0000-0003-4218-7291
Yaozhou HuangPharmaceutical Department of Sichuan University West China Hospital, Chengdu, Sichuan 610041, China.ORCID https://orcid.org/0000-0002-3051-8674
Tianping LiPharmaceutical Department of Sichuan University West China Hospital, Chengdu, Sichuan 610041, China.ORCID https://orcid.org/0000-0002-8516-7664
Sichuan University · CNChina Pharmaceutical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The role of 5-methylcytosine-related long noncoding RNAs (m5C-lncRNAs) in bladder cancer (BLCA) remains unclear. Here, we aim to study the prognostic value, gene expression characteristics, and correlation between the m5C-lncRNA risk model and the tumor microenvironment, immune infiltration, and tumor mutations in BLCA. After collecting BLCA patient RNA sequence transcriptome data, clinical information and mutation data from the Cancer Genome Atlas (TCGA) database, 17 m5C-related lncRNAs independently correlated with OS were obtained by Lasso and multivariate Cox regression analysis, and a risk model was constructed. Univariate Cox, multivariate Cox regression analysis, and the C-index curve proved that the risk model was a significant independent prognostic indicator for patients with BLCA. ESTIMATE and CIBERSORT indicated that the higher the number of immune cells and stromal cells in TME, the higher the prognostic risk. We found that in the low-risk group, the expression levels of immune cells that predicted a good prognosis were higher, including plasma cells, regulatory T cells, and CD 8 T cells. There is a negative correlation between TMB and risk score. The TMB of the low-risk group is significantly higher than that of the high-risk group. In conclusion, the m5C-related risk model is crucial to predict the prognosis of patients with BLCA.

Indexed as

RNA, Long NoncodingUrinary Bladder Neoplasms5-MethylcytosineBiomarkers, TumorGene Expression Regulation, NeoplasticHumansTumor Microenvironment5-MethylcytosineBiomarkers, TumorRNA, Long Noncoding

Identifiers

PMID35371346
PMCPMC8966750
OpenAlexW4223595846

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.