Evidence map›Paper›PMID 35370895›Full record

ArticleFrontiers in neurology2022

A Decentralized ComBat Algorithm and Applications to Functional Network Connectivity.

Biozid Bostami, Frank G Hillary, Harm Jan van der Horn, Joukje van der Naalt, Vince D Calhoun, Victor M Vergara

Abstract read
In one paragraph

Article in Frontiers in neurology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Biozid BostamiDepartment of Computer Science, Tri-institutional Center for Translational Research in Neuroimaging and Data Science, Georgia State University, Atlanta, GA, United States.
Frank G HillaryDepartment of Psychology, Penn State University, State College, PA, United States.
Harm Jan van der HornDepartment of Developmental Neurology, University of Groningen, University Medical Center Groningen, Groningen, Netherlands.
Joukje van der NaaltDepartment of Medical Sciences, University of Groningen, University Medical Center Groningen, Groningen, Netherlands.
Vince D CalhounDepartment of Computer Science, Tri-institutional Center for Translational Research in Neuroimaging and Data Science, Georgia State University, Atlanta, GA, United States.
Victor M VergaraDepartment of Computer Science, Tri-institutional Center for Translational Research in Neuroimaging and Data Science, Georgia State University, Atlanta, GA, United States.

Funding

ENIGMA-COINSTAC-APOE2 Functional and structural connectome protective mechanisms for Alzheimer’s disease and mood disorders: Request for supplemental funds for NIH R01:1R01MH121246R01MH121246 · NIMH · OHIO STATE UNIVERSITY · PI CALHOUN, VINCE D, TURNER, JESS · 2019 to 2023
$5.0M
A decentralized macro and micro gene-by-environment interaction analysis of substance use behavior and its brain biomarkers R01DA049238 · NIDA · GEORGIA STATE UNIVERSITY · PI CALHOUN, VINCE D, LIU, JINGYU · 2019 to 2023
$2.9M
Advancing Secondary Data Analysis: the ENIGMA Brain Injury Data Harmonization InitiativeR33NS120249 · NINDS · PENNSYLVANIA STATE UNIVERSITY, THE · PI DENNIS, EMILY LARSEN, HILLARY, FRANK GERARD · 2023 to 2025
$2.6M
Advancing Secondary Data Analysis: the ENIGMA Brain Injury Data Harmonization InitiativeR61NS120249 · NINDS · PENNSYLVANIA STATE UNIVERSITY, THE · PI DENNIS, EMILY LARSEN, HILLARY, FRANK GERARD · 2020 to 2021
$1.9M
NIDA NIH HHS R01 DA049238NIMH NIH HHS R01 MH121246NINDS NIH HHS R33 NS120249NINDS NIH HHS R61 NS120249
6 · The paper itself

Abstract

Recent studies showed that working with neuroimage data collected from different research facilities or locations may incur additional source dependency, affecting the overall statistical power. This problem can be mitigated with data harmonization approaches. Recently, the ComBat method has become commonly adopted for various neuroimage modalities. While open neuroimaging datasets are becoming more common, a substantial amount of data is still unable to be shared for various reasons. In addition, current approaches require moving all the data to a central location, which requires additional resources and creates redundant copies of the same datasets. To address these issues, we propose a decentralized harmonization approach that does not create redundant copies of the original datasets and performs remote operations on the datasets separately without sharing any individual subject data, ensuring a certain level of privacy and reducing regulatory hurdles. We proposed a novel approach called "Decentralized ComBat" which can harmonize datasets separately without combining the datasets. We tested our model by harmonizing functional network connectivity datasets from two traumatic brain injury studies in a decentralized way. Also, we used simulations to analyze the performance and scalability of our model when the number of data collection sites increases. We compare the output with centralized ComBat and show that the proposed approach produces similar results, increasing the sensitivity of the functional network connectivity analysis and validating our approach. Simulations show that our model can be easily scaled to many more datasets based on the requirement. In sum, we believe this provides a powerful tool, further complementing open data and allowing for integrating public and private datasets.

Indexed as

brain networkfederated learningfunctional connectivityharmonizationneuroimage analysis

Identifiers

PMID35370895
PMCPMC8965063

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.