Evidence map›Paper›PMID 35369349›Full record

ArticleFrontiers in cardiovascular medicine2022

Comprehensive Analysis of Key m6A Modification Related Genes and Immune Infiltrates in Human Aortic Dissection.

Fanxing Yin, Hao Zhang, Panpan Guo, Yihao Wu, Xinya Zhao, Fangjun Li, Ce Bian, Chen Chen, Yanshuo Han, Kun Liu

Open access · goldAbstract read
In one paragraph

Article in Frontiers in cardiovascular medicine, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 13 citations in OpenAlex.

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  8. NAging and disease · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Fanxing YinSchool of Life and Pharmaceutical Sciences, Dalian University of Technology, Dalian, China.
Hao ZhangSchool of Life and Pharmaceutical Sciences, Dalian University of Technology, Dalian, China.
Panpan GuoSchool of Life and Pharmaceutical Sciences, Dalian University of Technology, Dalian, China.
Yihao WuSchool of Life and Pharmaceutical Sciences, Dalian University of Technology, Dalian, China.
Xinya ZhaoSchool of Life and Pharmaceutical Sciences, Dalian University of Technology, Dalian, China.
Fangjun LiSchool of Life and Pharmaceutical Sciences, Dalian University of Technology, Dalian, China.
Ce BianDepartment of Cardiovascular Surgery, The General Hospital of the PLA Rocket Force, Beijing Normal University, Beijing, China.
Chen ChenSchool of Biomedical Sciences, The University of Queensland, Brisbane, QLD, Australia.
Yanshuo HanSchool of Life and Pharmaceutical Sciences, Dalian University of Technology, Dalian, China.
Kun LiuDepartment of Cardiac Surgery, Affiliated Hospital of Guizhou Medical University, Guiyang, China.
Dalian University of Technology · CNDalian University · CNAffiliated Hospital of Guizhou Medical University · CNBeijing Normal University · CNUniversity of Queensland · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objective: To identify the feature of N6-methyladenosine (m6A) methylation modification genes in acute aortic dissection (AAD) and explore their relationships with immune infiltration. Methods: The GSE52093 dataset including gene expression data from patients with AAD and healthy controls was downloaded from Gene Expression Omnibus (GEO) database in order to obtain the differentially expressed genes (DEGs). The differentially methylated m6A genes were obtained from the GSE147027 dataset. The differentially expressed m6A-related genes were obtained based on the intersection results. Meanwhile, the protein-protein interaction (PPI) network of differentially expressed m6A-related genes was constructed, and hub genes with close relationships in the network were selected. Later, hub genes were verified by using the GSE153434 dataset. Thereafter, the relationships between these genes and immune cells infiltration were analyzed. Results: A total of 279 differentially expressed m6A-related genes were identified in the GSE52093 and GSE147027 datasets. Among them, 94 genes were up-regulated in aortic dissection (AD), while the remaining 185 were down-regulated. As indicated by Gene Ontology (GO) functional enrichment and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses, these genes were mainly associated with extracellular matrix (ECM) and smooth muscle cells (SMCs). The seven hub genes, namely, DDX17, CTGF, FLNA, SPP1, MYH11, ITGA5 and CACNA1C, were all confirmed as the potential biomarkers for AD. According to immune infiltration analysis, it was found that hub genes were related to some immune cells. For instance, DDX17, FLNA and MYH11 were correlated with Macrophages M2. Conclusion: Our study identifies hub genes of AD that may serve as the potential biomarkers, illustrates of the molecular mechanism of AD, and provides support for subsequent research and treatment development.

Indexed as

acute aortic dissectionbioinformaticshub genesimmune infiltrationm6A

Identifiers

PMID35369349
PMCPMC8967178
OpenAlexW4221063170

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.