Evidence map›Paper›PMID 35367235›Full record

ArticleBiophysical journal2022

Kinetics and thermodynamics of BI-BII interconversion altered by T:G mismatches in DNA.

M N Westwood, C C Johnson, Nathan A Oyler, Gary A Meints

Open access · greenAbstract read
In one paragraph

Article in Biophysical journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.6field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

M N WestwoodDepartment of Chemistry and Biochemistry, Missouri State University, Springfield, Missouri.
C C JohnsonDepartment of Chemistry and Biochemistry, Missouri State University, Springfield, Missouri.
Nathan A OylerDepartment of Chemistry, University of Missouri-Kansas City, Kansas City, Missouri.
Gary A MeintsDepartment of Chemistry and Biochemistry, Missouri State University, Springfield, Missouri. Electronic address: garymeints@missouristate.edu.
Missouri State University · USUniversity of Missouri–Kansas City · US

Funding

Solid-State NMR Studies of the Dynamics of Damaged DNAR15CA130008 · NCI · MISSOURI STATE UNIVERSITY · PI MEINTS, GARY A · 2008 to 2008
$175k
NCI NIH HHS R15 CA130008
6 · The paper itself

Abstract

T:G mismatches in DNA result in humans primarily from deamination of methylated CpG sites. They are repaired by redundant systems, such as thymine DNA glycosylase (TDG) and methyl-binding domain enzyme (MBD4), and maintenance of these sites has been implicated in epigenetic processes. The process by which these enzymes identify a canonical DNA base in the incorrect basepairing context remains a mystery. However, the conserved contacts of the repair enzymes with the DNA backbone suggests a role for protein-phosphate interaction in the recognition and repair processes. We have used

Indexed as

Thymine DNA GlycosylaseDNADNA RepairEpigenesis, GeneticHumansKineticsThermodynamicsDNAThymine DNA Glycosylase

Identifiers

PMID35367235
PMCPMC9117933
OpenAlexW4221057562

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.