Evidence map›Paper›PMID 35365742›Full record

ArticleScientific reports2022

Metabolomics approach to assess the effect of siphonal autotomy on metabolic characteristics of razor clam Solen grandis.

Yangping Wu, Aihua Chen, Yu Zhang, Zhidong Zhang, Yi Cao, Suhua Chen, Zhen Tian, Qiujie Li

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.0field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Yangping WuMarine Fisheries Institute of Jiangsu Province, Nantong, 226007, China.
Aihua ChenMarine Fisheries Institute of Jiangsu Province, Nantong, 226007, China. chenah540540@aliyun.com.
Yu ZhangMarine Fisheries Institute of Jiangsu Province, Nantong, 226007, China.
Zhidong ZhangMarine Fisheries Institute of Jiangsu Province, Nantong, 226007, China.
Yi CaoMarine Fisheries Institute of Jiangsu Province, Nantong, 226007, China.
Suhua ChenMarine Fisheries Institute of Jiangsu Province, Nantong, 226007, China.
Zhen TianMarine Fisheries Institute of Jiangsu Province, Nantong, 226007, China.
Qiujie LiMarine Fisheries Institute of Jiangsu Province, Nantong, 226007, China.
Zhejiang Marine Fisheries Research Institute · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Autotomy appendages are fundamental evolutionary adaptations to escape predation. The siphon is an important foraging organ for bivalves. Here, we report the first demonstration of autotomy of the siphon in marine bivalves (razor clam Solen grandis) and the effect of siphonal autotomy in S. grandis on foraging and metabolic characteristics. In this study, the feeding rate and digestive enzyme activities upon siphonal autotomy in razor clams were investigated. Moreover, endogenous metabolites pre/post-autotomy of the siphon were investigated using liquid chromatography tandem-mass spectrometry (LC-MS). The feeding rate and digestive enzyme activities decreased significantly after siphonal autotomy in S. grandis (P < 0.05), suggesting that autotomy of the siphon negatively affected its foraging. These results might be related to the reduction in the foraging radius. Additionally, the effect of autotomy was investigated on a total of 34 differentially abundant metabolites, and pathway analysis indicated that 32 differentially enriched metabolic pathways were worthy of attention. Further integrated key metabolic pathway analysis showed that glycine, serine and threonine metabolism; taurine and hypotaurine metabolism; biotin metabolism; vitamin B6 and thiamine metabolism were significantly relevant pathways in S. grandis pre/post-autotomy of the siphon. The downregulation of glycine, taurine, and hypotaurine is expected to indicate a shortage of intermediate compounds and energy in S. grandis. Therefore, to provide the required energy and materials for siphon regeneration in S. grandis, we anticipated that it would be necessary to supplement these as exogenous metabolites from the daily diet.

Indexed as

BivalviaMetabolomicsAnimalsChromatography, LiquidMass SpectrometryMetabolic Networks and Pathways

Identifiers

PMID35365742
PMCPMC8976079
OpenAlexW4220695676

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.