ArticleBMC plant biology2022
Genome-wide identification and expression analysis of the plant-specific PLATZ gene family in Tartary buckwheat (Fagopyrum tataricum).
Article in BMC plant biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.
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13 citing papers in PubMed, 25 citations in OpenAlex.
- Effector FpECIR from Fusarium pseudograminearum targets wheat ethylene signaling pathway to suppress plant immunity.Stress biology · 2026Article
- Identification and characterization of LIM family genes in Tartary buckwheat: insights into functional divergence and abiotic stress responses.BMC plant biology · 2026Article
- Genome-Wide Identification of the PLATZ Transcription Factor Family inPlants (Basel, Switzerland) · 2026Article
- PLATZ transcription factors gene family in Brassica napus: genome-wide identification and expression analysis to abiotic stresses.BMC genomics · 2025Article
- RcPLATZ8 as a novel negative regulator of flowering in Rosa chinensis.Plant cell reports · 2025Article
- Exploring the Roles of theInternational journal of molecular sciences · 2025Article
- Comprehensive analysis of PLATZ family genes and their responses to abiotic stresses in Barley.BMC plant biology · 2024Article
- Genome-Wide Identification of thePlants (Basel, Switzerland) · 2024Article
- Identification and Functional Characterization of Abiotic Stress Tolerance-RelatedInternational journal of molecular sciences · 2024Article
- GhiPLATZ17 and GhiPLATZ22, zinc-dependent DNA-binding transcription factors, promote salt tolerance in upland cotton.Plant cell reports · 2024Article
- JmjC domain-containing histone demethylase gene family in Chinese cabbage: Genome-wide identification and expressional profiling.PloS one · 2024Article
- Genome-Wide Identification and Phylogenetic and Expression Analyses of theInternational journal of molecular sciences · 2023Article
- Comprehensive Genome-Wide Analysis and Expression Pattern Profiling ofPlants (Basel, Switzerland) · 2022Article
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8 authors at 2 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundPlant AT-rich sequence and zinc-binding (PLATZ) proteins belong to a novel class of plant-specific zinc-finger-dependent DNA-binding proteins that play essential roles in plant growth and development. Although the PLATZ gene family has been identified in several species, systematic identification and characterization of this gene family has not yet been carried out for Tartary buckwheat, which is an important medicinal and edible crop with high nutritional value. The recent completion of Tartary buckwheat genome sequencing has laid the foundation for this study.
resultsA total of 14 FtPLATZ proteins were identified in Tartary buckwheat and were classified into four phylogenetic groups. The gene structure and motif composition were similar within the same group, and evident distinctions among different groups were detected. Gene duplication, particularly segmental duplication, was the main driving force in the evolution of FtPLATZs. Synteny analysis revealed that Tartary buckwheat shares more orthologous PLATZ genes with dicotyledons, particularly soybean. In addition, the expression of FtPLATZs in different tissues and developmental stages of grains showed evident specificity and preference. FtPLATZ3 may be involved in the regulation of grain size, and FtPLATZ4 and FtPLATZ11 may participate in root development. Abundant and variable hormone-responsive cis-acting elements were distributed in the promoter regions of FtPLATZs, and almost all FtPLATZs were significantly regulated after exogenous hormone treatments, particularly methyl jasmonate treatment. Moreover, FtPLATZ6 was significantly upregulated under all exogenous hormone treatments, which may indicate that this gene plays a critical role in the hormone response of Tartary buckwheat.
conclusionsThis study lays a foundation for further exploration of the function of FtPLATZ proteins and their roles in the growth and development of Tartary buckwheat and contributes to the genetic improvement of Tartary buckwheat.
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