Evidence map›Paper›PMID 35364693›Full record

ArticleAdvances in biochemical engineering/biotechnology2022

Engineering the Reductive Glycine Pathway: A Promising Synthetic Metabolism Approach for C1-Assimilation.

Nico J Claassens, Ari Satanowski, Viswanada R Bysani, Beau Dronsella, Enrico Orsi, Vittorio Rainaldi, Suzan Yilmaz, Sebastian Wenk, Steffen N Lindner

Open access · greenAbstract read
PubMed Publisher
In one paragraph

Article in Advances in biochemical engineering/biotechnology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
13.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 29 citations in OpenAlex.

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  9. OptimizingFrontiers in bioengineering and biotechnology · 2023
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  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Nico J ClaassensLaboratory of Microbiology, Wageningen University and Research, Wageningen, The Netherlands. nico.claassens@wur.nl.
Ari SatanowskiSystems and Synthetic Metabolism Group, Max Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany.
Viswanada R BysaniSystems and Synthetic Metabolism Group, Max Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany.
Beau DronsellaSystems and Synthetic Metabolism Group, Max Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany.
Enrico OrsiSystems and Synthetic Metabolism Group, Max Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany.
Vittorio RainaldiSystems and Synthetic Metabolism Group, Max Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany.
Suzan YilmazLaboratory of Microbiology, Wageningen University and Research, Wageningen, The Netherlands.
Sebastian WenkSystems and Synthetic Metabolism Group, Max Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany.
Steffen N LindnerSystems and Synthetic Metabolism Group, Max Planck Institute of Molecular Plant Physiology, Potsdam-Golm, Germany.
Max Planck Institute of Molecular Plant Physiology · DECharité - Universitätsmedizin Berlin · DEWageningen University & Research · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In recent years the reductive glycine pathway (rGlyP) has emerged as a promising pathway for the assimilation of formate and other sustainable C1-feedstocks for future biotechnology. It was originally proposed as an attractive "synthetic pathway" to support formatotrophic growth due to its high ATP efficiency, linear structure, and limited overlap with native pathways in most microbial hosts. Here, we present the current state of research on this pathway including breakthroughs on its engineering. Different variants of the rGlyP are discussed, including its core module for formate to glycine conversion, as well as varying modules for substrate conversion to formate, and glycine assimilation routes. Very recently, the rGlyP has been successfully implemented for synthetic formatotrophic growth, as well as for growth on methanol, in some bacterial hosts. We discuss the engineering strategies employed in these studies, including growth-coupled selection of functional pathway modules. We also compare the rGlyP to other natural and synthetic C1-assimilation pathways. Finally, we provide an outlook on open challenges and opportunities for the rGlyP, including its engineering into more biotechnological hosts, as well as the still-to-be realized production of value-added chemicals via this pathway. We expect that further research on the rGlyP will support the efficient use of sustainable C1-substrates in bioproduction.

Indexed as

GlycineMetabolic EngineeringBiotechnologyFormatesFormatesGlycineFormateGlycine cleavage/synthase systemMetabolic engineeringMethanolOne-carbon substratesReductive glycine pathwaySynthetic biology

Identifiers

PMID35364693
OpenAlexW4226124397

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.