Evidence map›Paper›PMID 35364106›Full record

ArticleBiophysical journal2022

Bromodomains regulate dynamic targeting of the PBAF chromatin-remodeling complex to chromatin hubs.

Charles A Kenworthy, Nayem Haque, Shu-Hao Liou, Panagiotis Chandris, Vincent Wong, Patrycja Dziuba, Luke D Lavis, Wei-Li Liu, Robert H Singer, Robert A Coleman

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. SMARCD1 and Its Functional Relevance in SWI/SNF and Cancer.International journal of molecular sciences · 2026
    Review
  4. Article
  5. Article
  6. Regulation of Transcriptional Bursting and Spatial Patterning in EarlybioRxiv : the preprint server for biology · 2025
    Article
  7. Review
  8. Article
  9. Chromatin remodellers as therapeutic targets.Nature reviews. Drug discovery · 2024
    Review
  10. Review
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 1 country.

Charles A KenworthyGruss-Lipper Biophotonics Center, Department of Cell Biology, Albert Einstein College of Medicine, New York.
Nayem HaqueGruss-Lipper Biophotonics Center, Department of Cell Biology, Albert Einstein College of Medicine, New York.
Shu-Hao LiouGruss-Lipper Biophotonics Center, Department of Cell Biology, Albert Einstein College of Medicine, New York.
Panagiotis ChandrisSection on High Resolution Optical Imaging, National Institute on Biomedical Imaging and Bioengineering, National Institutes of Health, Bethesda, Maryland.
Vincent WongGruss-Lipper Biophotonics Center, Department of Cell Biology, Albert Einstein College of Medicine, New York.
Patrycja DziubaGruss-Lipper Biophotonics Center, Department of Cell Biology, Albert Einstein College of Medicine, New York.
Luke D LavisJanelia Research Campus, Howard Hughes Medical Institute, Ashburn, Virginia.
Wei-Li LiuGruss-Lipper Biophotonics Center, Department of Cell Biology, Albert Einstein College of Medicine, New York.
Robert H SingerGruss-Lipper Biophotonics Center, Department of Cell Biology, Albert Einstein College of Medicine, New York; Janelia Research Campus, Howard Hughes Medical Institute, Ashburn, Virginia.
Robert A ColemanGruss-Lipper Biophotonics Center, Department of Cell Biology, Albert Einstein College of Medicine, New York. Electronic address: robert.coleman2@einsteinmed.edu.
Albert Einstein College of Medicine · USHoward Hughes Medical Institute · USNational Institutes of Health · US

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM007288 · NIGMS · YESHIVA UNIVERSITY · PI AKABAS, MYLES H. · 1985 to 2022
$35.6M
Mechanism of MRNA Localization and Localized Translation in NeuronsR01NS083085 · NINDS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI Sulagna Das, Robert H Singer · 2013 to 2026
$9.0M
Einstein Postbaccalaureate Research Education ProgramR25GM104547 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI AKABAS, MYLES H. · 2013 to 2023
$4.0M
Dissecting the Dynamic Interplay Between, p53, Chromatin and Transcriptional Bursting in Single CellsR01GM126045 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI COLEMAN, ROBERT · 2018 to 2025
$2.9M
Training Program in Cellular and Molecular Biology and GeneticsT32GM145438 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI CHARLES C QUERY · 2023 to 2026
$2.4M
Tools For Imaging the Functional Genome in Living Cells and TissuesU01DA047729 · NIDA · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI DARZACQ, XAVIER, SINGER, ROBERT H · 2018 to 2019
$1.7M
NIDA NIH HHS U01 DA047729NIGMS NIH HHS R01 GM126045NIGMS NIH HHS R25 GM104547NIGMS NIH HHS T32 GM007288NIGMS NIH HHS T32 GM145438NINDS NIH HHS R01 NS083085
6 · The paper itself

Abstract

Chromatin remodelers actively target arrays of acetylated nucleosomes at select enhancers and promoters to facilitate or shut down the repeated recruitment of RNA polymerase II during transcriptional bursting. It is poorly understood how chromatin remodelers such as PBAF dynamically target different chromatin states inside a live cell. Our live-cell single-molecule fluorescence microscopy study reveals chromatin hubs throughout the nucleus where PBAF rapidly cycles on and off the genome. Deletion of PBAF's bromodomains impairs targeting and stable engagement of chromatin in hubs. Dual color imaging reveals that PBAF targets both euchromatic and heterochromatic hubs with distinct genome-binding kinetic profiles that mimic chromatin stability. Removal of PBAF's bromodomains stabilizes H3.3 binding within chromatin, indicating that bromodomains may play a direct role in remodeling of the nucleosome. Our data suggests that PBAF's dynamic bromodomain-mediated engagement of a nucleosome may reflect the chromatin-remodeling potential of differentially bound chromatin states.

Indexed as

ChromatinNucleosomesAcetylationChromatin Assembly and DisassemblyDNA-Binding ProteinsHistonesTranscription FactorsChromatinDNA-Binding ProteinsHistonesNucleosomesTranscription Factorsbromodomainchromatin remodelinghistone acetylationhistone H3.3nuclear hubsPBAFsingle-molecule tracking

Identifiers

PMID35364106
PMCPMC9117891
OpenAlexW4226071883

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.