Evidence map›Paper›PMID 35363773›Full record

ArticlePloS one2022

Spontaneous rate of clonal single nucleotide mutations in Daphnia galeata.

Markus Pfenninger, Halina Binde Doria, Jana Nickel, Anne Thielsch, Klaus Schwenk, Mathilde Cordellier

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.6field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 1 country.

Markus PfenningerDepartment Molecular Ecology, Senckenberg Biodiversity and Climate Research Centre, Frankfurt am Main, Germany.ORCID 0000-0002-1547-7245
Halina Binde DoriaDepartment Molecular Ecology, Senckenberg Biodiversity and Climate Research Centre, Frankfurt am Main, Germany.ORCID 0000-0002-7166-925X
Jana NickelInstitut für Zoologie, Fakultät für Mathematik, Informatik und Naturwissenschaften, Universität Hamburg, Hamburg, Germany.ORCID 0000-0002-5584-1160
Anne ThielschInstitute for Environmental Sciences, Universität Koblenz-Landau, Landau, Germany.
Klaus SchwenkInstitute for Environmental Sciences, Universität Koblenz-Landau, Landau, Germany.
Mathilde CordellierInstitut für Zoologie, Fakultät für Mathematik, Informatik und Naturwissenschaften, Universität Hamburg, Hamburg, Germany.ORCID 0000-0001-7376-4560
Universität Hamburg · DEUniversity of Koblenz and Landau · DEJohannes Gutenberg University Mainz · DESenckenberg Biodiversity and Climate Research Centre · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mutations are the ultimate source of heritable variation and therefore the fuel for evolution, but direct estimates of mutation rates exist only for few species. We estimated the spontaneous single nucleotide mutation rate among clonal generations in the waterflea Daphnia galeata with a short-term mutation accumulation approach. Individuals from eighteen mutation accumulation lines over five generations were deep sequenced to count de novo mutations that were not present in a pool of F1 individuals, representing the parental genotype. We identified 12 new nucleotide mutations in 90 clonal generational passages. This resulted in an estimated single nucleotide mutation rate of 0.745 x 10-9 (95% c.f. 0.39 x 10-9-1.26 x 10-9), which is slightly lower than recent estimates for other Daphnia species. We discuss the implications for the population genetics of Cladocerans.

Indexed as

DaphniaNucleotidesAnimalsGenetics, PopulationMutationMutation RateNucleotides

Identifiers

PMID35363773
PMCPMC8975155
OpenAlexW4220732020

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.