Evidence map›Paper›PMID 35363149›Full record

ArticleJMIR formative research2022

Development and Application of an Open Tool for Sharing and Analyzing Integrated Clinical and Environmental Exposures Data: Asthma Use Case.

Karamarie Fecho, Stanley C Ahalt, Stephen Appold, Saravanan Arunachalam, Emily Pfaff, Lisa Stillwell, Alejandro Valencia, Hao Xu, David B Peden

Open access · goldAbstract read
In one paragraph

Article in JMIR formative research, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Karamarie FechoRenaissance Computing Institute, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.ORCID https://orcid.org/0000-0002-6704-9306
Stanley C AhaltRenaissance Computing Institute, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.ORCID https://orcid.org/0000-0002-8395-1279
Stephen AppoldKenan-Flagler Business School, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.ORCID https://orcid.org/0000-0002-5165-3111
Saravanan ArunachalamInstitute for the Environment, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.ORCID https://orcid.org/0000-0002-6836-6944
Emily PfaffNorth Carolina Translational and Clinical Sciences Institute, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.ORCID https://orcid.org/0000-0002-6840-9756
Lisa StillwellRenaissance Computing Institute, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.ORCID https://orcid.org/0000-0001-7609-6692
Alejandro ValenciaInstitute for the Environment, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.ORCID https://orcid.org/0000-0002-9004-9814
Hao XuRenaissance Computing Institute, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.ORCID https://orcid.org/0000-0001-6659-6511
David B PedenNorth Carolina Translational and Clinical Sciences Institute, University of North Carolina at Chapel Hill, Chapel Hill, NC, United States.ORCID https://orcid.org/0000-0003-4526-4627
University of North Carolina at Chapel Hill · US

Funding

Re-Entry Supplement: Investigation of Oral Microbial Enzymes for the Detection and Treatment of Periodontal DiseaseUL1TR002489 · NCATS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BUSE, JOHN BERNARD, SHAHEEN, NICHOLAS J · 2018 to 2022
$48.6M
UNC-CH CENTER FOR ENVIRONMENTAL HEALTH &SUSCEPTIBILITYP30ES010126 · NIEHS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI Hazel B Nichols · 2001 to 2026
$36.3M
ICEES+ Knowledge Provider: Leveraging Open Clinical and Environmental Data to Accelerate and Drive Innovation in Translational Research and Clinical Care.OT2TR003430 · NCATS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI AHALT, STANLEY CARLTON, KRISHNAMURTHY, ASHOK KUMAR · 2020 to 2024
$4.4M
Biomedical Data Translator Technical Feasibility Assessment and Architecture DesignOT3TR002020 · NCATS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI AHALT, STANLEY CARLTON, TROPSHA, ALEXANDER · 2016 to 2019
$3.1M
NCATS NIH HHS OT2 TR003430NCATS NIH HHS OT3 TR002020NCATS NIH HHS UL1 TR002489NIEHS NIH HHS P30 ES010126
6 · The paper itself

Abstract

backgroundThe Integrated Clinical and Environmental Exposures Service (ICEES) serves as an open-source, disease-agnostic, regulatory-compliant framework and approach for openly exposing and exploring clinical data that have been integrated at the patient level with a variety of environmental exposures data. ICEES is equipped with tools to support basic statistical exploration of the integrated data in a completely open manner.

objectiveThis study aims to further develop and apply ICEES as a novel tool for openly exposing and exploring integrated clinical and environmental data. We focus on an asthma use case.

methodsWe queried the ICEES open application programming interface (OpenAPI) using a functionality that supports chi-square tests between feature variables and a primary outcome measure, with a Bonferroni correction for multiple comparisons (α=.001). We focused on 2 primary outcomes that are indicative of asthma exacerbations: annual emergency department (ED) or inpatient visits for respiratory issues; and annual prescriptions for prednisone.

resultsOf the 157,410 patients within the asthma cohort, 26,332 (16.73%) had 1 or more annual ED or inpatient visits for respiratory issues, and 17,056 (10.84%) had 1 or more annual prescriptions for prednisone. We found that close proximity to a major roadway or highway, exposure to high levels of particulate matter ≤2.5 μm (PM

conclusionsOur results demonstrate that the open-source ICEES can be used to replicate and extend published findings on factors that influence asthma exacerbations. As a disease-agnostic, open-source approach for integrating, exposing, and exploring patient-level clinical and environmental exposures data, we believe that ICEES will have broad adoption by other institutions and application in environmental health and other biomedical fields.

Indexed as

airborne pollutant exposuresasthma exacerbationelectronic health recordsmedication exposuresopen patient datasocioeconomic exposures

Identifiers

PMID35363149
PMCPMC9015759
OpenAlexW4206527080

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.