Evidence map›Paper›PMID 35362719›Full record

ArticleApplied microbiology and biotechnology2022

Production of fengycin from D-xylose through the expression and metabolic regulation of the Dahms pathway.

Wenting Gao, Ying Yin, Pan Wang, Wei Tan, Mingliang He, Jianping Wen

Abstract read
PubMed Publisher
In one paragraph

Article in Applied microbiology and biotechnology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Construction ofFrontiers in microbiology · 2023
    Article
  5. Article
  6. Systemically engineeringFrontiers in bioengineering and biotechnology · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Wenting GaoKey Laboratory of Systems Bioengineering (Ministry of Education), Tianjin University, Tianjin, China.
Ying YinKey Laboratory of Systems Bioengineering (Ministry of Education), Tianjin University, Tianjin, China.
Pan WangKey Laboratory of Systems Bioengineering (Ministry of Education), Tianjin University, Tianjin, China.
Wei TanKey Laboratory of Systems Bioengineering (Ministry of Education), Tianjin University, Tianjin, China.
Mingliang HeKey Laboratory of Systems Bioengineering (Ministry of Education), Tianjin University, Tianjin, China.
Jianping WenKey Laboratory of Systems Bioengineering (Ministry of Education), Tianjin University, Tianjin, China. jpwen@tju.edu.cn.ORCID http://orcid.org/0000-0001-5388-5680
Tianjin University · CN

Funding

national key research and development program of china No. 2018YFA0902200
6 · The paper itself

Abstract

D-Xylose is a key component of lignocellulosic biomass and the second-most abundant carbohydrate on the planet. As one of the most powerful cyclo-lipopeptide antibiotics, fengycin displays strong wide-spectrum antifungal and antiviral, as well as potential anti-cancer activity. Pyruvate is a key metabolite linking the biosynthesis of fatty acids and amino acids, the precursors for fengycin. In this study, the genes encoding the Dahms xylose-utilization pathway were integrated into the amyE site of Bacillus subtilis 168, and based on the metabolic characteristics of the Dahms pathway, the acetate kinase (ackA) and lactate dehydrogenase (ldh) genes were knocked out. Then, the metabolic control module II was designed to convert glycolaldehyde, another intermediate of the Dahms pathway, in addition to pathways for the conversion of acetaldehyde into malic acid and oxaloacetic acid, resulting in strain BSU03. In the presence of module II, the content of acetic and lactic acid decreased significantly, and the xylose uptake efficiency increased. At the same time, the yield of fengycin increased by 87% compared to the original strain. Additionally, the underlying factors for the increase of fengycin titer were revealed through metabonomic analysis. This study therefore demonstrates that this regulation approach can not only optimize the intracellular fluxes for the Dahms pathway, but is also conducive to the synthesis of secondary metabolites similar to fengycin. KEY POINTS: • The expression and effect of the Dahms pathway on the synthesis of fengycin in Bacillus subtilis 168. • The expression of regulatory module II can promote the metabolic rate of the Dahms pathway and increase the synthesis of the fengycin.

Indexed as

LipopeptidesXyloseAntifungal AgentsBacillus subtilisAntifungal AgentsfengycinLipopeptidesXyloseBacillus subtilis 168Dahms pathwayD-XyloseFengycinMetabolic engineering

Identifiers

PMID35362719
OpenAlexW4220980067

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.