ArticleScientific reports2022
Comparative genomic analysis of vertebrate mitochondrial reveals a differential of rearrangements rate between taxonomic class.
Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.
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34 citing papers in PubMed, 50 citations in OpenAlex.
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- Phylogenetic Characteristics of a Newly Sequenced Mitochondrial Genome of Monodactylus sebae (Eupercaria, Monodactylidae).Biochemical genetics · 2026Article
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- Mitochondrial Phylogenomics and Genome Evolution in Anura: Insights From Structure and Gene Order Rearrangements.Ecology and evolution · 2026Article
- Characteristics and Phylogenetic Considerations of the Newly Sequenced Mitochondrial Genome ofBiology · 2026Article
- Comparative mitogenomics of kingdom Fungi - evolutionary insights and metagenomic applications.Nucleic acids research · 2026Article
- Evolutionary patterns of the mitochondrial control region in vertebrates: A large-scale comparative analysis.PloS one · 2026Article
- Mitochondrial genomic variation, evolutionary dynamics, and phylogeny of forest-associatedIMA fungus · 2026Article
- Sequencing and phylogenetic analysis of the mitochondrial genome of the albino Northern snakehead,Mitochondrial DNA. Part B, Resources · 2026Article
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- Elucidating the Mitogenomic Blueprint of Pomadasys perotaei from the Eastern Atlantic: Characterization and Matrilineal Phylogenetic Insights into Haemulid Grunts (Teleostei: Lutjaniformes).Biochemical genetics · 2025Article
- Mitogenomic characterization and phylogenetic placement of the Red pandora Pagellus bellottii from the Eastern Atlantic Ocean within the family Sparidae.Scientific reports · 2025Article
- Mitochondrial Genome ofGenes · 2025Article
- Characterization of the Mitochondrial Genome of the Vietnamese Central Highland Wild Boar (Animals : an open access journal from MDPI · 2025Article
- Enhanced dynamicity: evolutionary insights into amphibian mitogenomes architecture.BMC genomics · 2025Article
- Comparative analysis of the mitochondrial genomes of the soft-shelled turtles Palea steindachneri and Pelodiscus axenaria and phylogenetic implications for Trionychia.Scientific reports · 2025Article
- The mitochondrial genomes of Iberian freshwater and diadromous fishes.Scientific data · 2025Article
- Complete Mitochondrial Genome of King Threadfin,Genes · 2025Article
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Authors and funding
6 authors at 2 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Vertebrate mitochondrial genomes have been extensively studied for genetic and evolutionary purposes, these are normally believed to be extremely conserved, however, different cases of gene rearrangements have been reported. To verify the level of rearrangement and the mitogenome evolution, we performed a comparative genomic analysis of the 2831 vertebrate mitochondrial genomes representing 12 classes available in the NCBI database. Using a combination of bioinformatics methods, we determined there is a high number of errors in the annotation of mitochondrial genes, especially in tRNAs. We determined there is a large variation in the proportion of rearrangements per gene and per taxonomic class, with higher values observed in Actinopteri, Amphibia and Reptilia. We highlight that these are results for currently available vertebrate sequences, so an increase in sequence representativeness in some groups may alter the rearrangement rates, so in a few years it would be interesting to see if these rates are maintained or altered with the new mitogenome sequences. In addition, within each vertebrate class, different patterns in rearrangement proportion with distinct hotspots in the mitochondrial genome were found. We also determined that there are eleven convergence events in gene rearrangement, nine of which are new reports to the scientific community.
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