ArticleBMC plant biology2022
Time-series transcriptome comparison reveals the gene regulation network under salt stress in soybean (Glycine max) roots.
Article in BMC plant biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.
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28 citing papers in PubMed, 57 citations in OpenAlex.
- Sucrose and starch metabolism pathways as candidate regulatory pathways in the salt stress response revealed by transcriptomic and metabolomic analysis during soybean (Glycine max) germination.Functional & integrative genomics · 2026Article
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- Physiological and biochemical variations in different pepper (Capsicum annuum var. conoides) varieties under salt stress.BMC plant biology · 2025Article
- Overexpression ofPlants (Basel, Switzerland) · 2025Article
- A comparative transcriptomic analysis provides insights into molecular mechanisms driving salt tolerance in soybean.Scientific reports · 2025Article
- Screening for GmRCD1-Interacting Proteins in Glycine Max and Characterization of the GmRCD1-GmNAC058 Interaction.International journal of molecular sciences · 2025Article
- Unlocking gene regulatory networks for crop resilience and sustainable agriculture.Nature biotechnology · 2025Review
- Using WGCNA and transcriptome profiling to identify hub genes for salt stress tolerance in germinating soybean seeds.Frontiers in plant science · 2025Article
- Genome-wide association study and transcriptome analysis reveal candidate genes related to drought stress in the germination stage of soybean.Frontiers in plant science · 2025Article
- Comparative Metabolome and Transcriptome Analyses Reveal Molecular Mechanisms Involved in the Responses of TwoPlants (Basel, Switzerland) · 2024Article
- Comparative Transcriptome Analysis of Salt-Tolerant and -Sensitive Soybean Cultivars under Salt Stress.International journal of molecular sciences · 2024Article
- Comprehensive transcriptome analysis of Asparagus officinalis in response to varying levels of salt stress.BMC plant biology · 2024Article
- Identification of QTNs, QTN-by-environment interactions, and their candidate genes for salt tolerance related traits in soybean.BMC plant biology · 2024Article
- Transcriptome Profiling of a Soybean Mutant with Salt Tolerance Induced by Gamma-ray Irradiation.Plants (Basel, Switzerland) · 2024Article
- Recent advances in exploring transcriptional regulatory landscape of crops.Frontiers in plant science · 2024Review
Corrections and comments
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Authors and funding
8 authors at 4 institutions in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundSoil salinity is a primary factor limiting soybean (Glycine max) productivity. Breeding soybean for tolerance to high salt conditions is therefore critical for increasing yield. To explore the molecular mechanism of soybean responses to salt stress, we performed a comparative transcriptome time-series analysis of root samples collected from two soybean cultivars with contrasting salt sensitivity.
resultsThe salt-tolerant cultivar 'Qi Huang No.34' (QH34) showed more differential expression of genes than the salt-sensitive cultivar 'Dong Nong No.50' (DN50). We identified 17,477 genes responsive to salt stress, of which 6644 exhibited distinct expression differences between the two soybean cultivars. We constructed the corresponding co-expression network and performed Gene Ontology term and Kyoto Encyclopedia of Genes and Genomes pathway enrichment analysis. The results suggested that phytohormone signaling, oxidoreduction, phenylpropanoid biosynthesis, the mitogen-activated protein kinase pathway and ribosome metabolism may play crucial roles in response to salt stress.
conclusionsOur comparative analysis offers a comprehensive understanding of the genes involved in responding to salt stress and maintaining cell homeostasis in soybean. The regulatory gene networks constructed here also provide valuable molecular resources for future functional studies and breeding of soybean with improved tolerance to salinity.
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