Evidence map›Paper›PMID 35359965›Full record

ArticleFrontiers in immunology2022

A Comprehensive Atlas of Immunological Differences Between Humans, Mice, and Non-Human Primates.

Zachary B Bjornson-Hooper, Gabriela K Fragiadakis, Matthew H Spitzer, Han Chen, Deepthi Madhireddy, Kevin Hu, Kelly Lundsten, David R McIlwain, Garry P Nolan

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 142 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
142citing papers in PubMed, 1 pooled it
12.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

142 citing papers in PubMed, 1 synthesis or guideline pooled it, 182 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Immunophenotyping Studies in Nonhuman Primate Models.Methods in molecular biology (Clifton, N.J.) · 2027
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  5. Characterization of immunoglobulin loci inNAR genomics and bioinformatics · 2026
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  10. Article
  11. Challenges in tracer development for tumor microenvironment (TME) imaging.European journal of nuclear medicine and molecular imaging · 2026
    Review
  12. Review
  13. Hepatic cellular stress response pathways exhibit species differences in basal and inducible activity.Toxicological sciences : an official journal of the Society of Toxicology · 2026
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. CD8iScience · 2026
    Article
  19. Article
  20. Article

82 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Zachary B Bjornson-HooperDepartment of Microbiology and Immunology, Stanford University, Stanford, CA, United States.
Gabriela K FragiadakisDepartment of Microbiology and Immunology, Stanford University, Stanford, CA, United States.
Matthew H SpitzerImmunology Program, Stanford University, Stanford, CA, United States.
Han ChenDepartment of Microbiology and Immunology, Stanford University, Stanford, CA, United States.
Deepthi MadhireddyDepartment of Microbiology and Immunology, Stanford University, Stanford, CA, United States.
Kevin HuDepartment of Microbiology and Immunology, Stanford University, Stanford, CA, United States.
Kelly LundstenBioLegend Inc, Advanced Cytometry, San Diego, CA, United States.
David R McIlwainDepartment of Microbiology and Immunology, Stanford University, Stanford, CA, United States.
Garry P NolanDepartment of Microbiology and Immunology, Stanford University, Stanford, CA, United States.
Stanford University · USBioLegend (United States) · US

Funding

Supplement to Enhance Wellness and Resiliency in the Graduate EnvironmentT32GM007276 · NIGMS · STANFORD UNIVERSITY · PI MORRISON, ASHBY J. · 1985 to 2023
$32.9M
Balanced signaling cues to guide cell transitions in the blood lineage continuumR01HL120724 · NHLBI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CHAKRABORTY, ARUP K., NOLAN, GARRY P · 2015 to 2019
$3.7M
Stanford Technology Accelerating Medicines Partnership CenterUH2AR067676 · NIAMS · STANFORD UNIVERSITY · PI ROBINSON, WILLIAM H, UTZ, PAUL JOSEPH · 2014 to 2020
$2.6M
Cancer Systems Biology Scholars ProgramR25CA180993 · NCI · STANFORD UNIVERSITY · PI PLEVRITIS, SYLVIA KATINA · 2014 to 2018
$2.2M
(PQD2)New Biomarkers and Pathways to Enhance Cure in Ovarian CancersR01CA184968 · NCI · STANFORD UNIVERSITY · PI FANTL, WENDY JANE, SIKIC, BRANIMIR I · 2014 to 2017
$2.0M
Quantitatively modeling immune responses to cancerDP5OD023056 · OD · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI SPITZER, MATTHEW · 2016 to 2020
$1.9M
Mass Cytometry Analysis of Signaling Dysfunction in Duchenne Muscular DystrophyR01NS089533 · NINDS · STANFORD UNIVERSITY · PI BLAU, HELEN M · 2014 to 2017
$1.3M
Multivariate statistical methods, flow cytometry, and network modeling.R01GM109836 · NIGMS · STANFORD UNIVERSITY · PI WONG, WING H. · 2014 to 2017
$1.2M
NCI NIH HHS R01 CA184968NCI NIH HHS R25 CA180993NHLBI NIH HHS R01 HL120724NIAMS NIH HHS UH2 AR067676NIGMS NIH HHS R01 GM109836NIGMS NIH HHS T32 GM007276NIH HHS DP5 OD023056NINDS NIH HHS R01 NS089533
6 · The paper itself

Abstract

Animal models are an integral part of the drug development and evaluation process. However, they are unsurprisingly imperfect reflections of humans, and the extent and nature of many immunological differences are unknown. With the rise of targeted and biological therapeutics, it is increasingly important that we understand the molecular differences in the immunological behavior of humans and model organisms. However, very few antibodies are raised against non-human primate antigens, and databases of cross-reactivity between species are incomplete. Thus, we screened 332 antibodies in five immune cell populations in blood from humans and four non-human primate species generating a comprehensive cross-reactivity catalog that includes cell type-specificity. We used this catalog to create large mass cytometry universal cross-species phenotyping and signaling panels for humans, along with three of the model organisms most similar to humans: rhesus and cynomolgus macaques and African green monkeys; and one of the mammalian models most widely used in drug development: C57BL/6 mice. As a proof-of-principle, we measured immune cell signaling responses across all five species to an array of 15 stimuli using mass cytometry. We found numerous instances of different cellular phenotypes and immune signaling events occurring within and between species, and detailed three examples (double-positive T cell frequency and signaling; granulocyte response to

Indexed as

MammalsT-LymphocytesAnimalsChlorocebus aethiopsCross ReactionsHumansMacaca fascicularisMacaca mulattaMiceMice, Inbred C57BLAfrican green monkey (AGM) (Chlorocebus aethiops)cynomolgus monkey (Macaca fascicularis)CyTOF mass cytometrymouse, immune cell signalingrhesus macaque (Macaca mulatta)

Identifiers

PMID35359965
PMCPMC8962947
OpenAlexW4225783808

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.