Evidence map›Paper›PMID 35359938›Full record

ArticleFrontiers in immunology2022

Single-Cell Multiomics Reveals Clonal T-Cell Expansions and Exhaustion in Blastic Plasmacytoid Dendritic Cell Neoplasm.

Erica A K DePasquale, Daniel Ssozi, Marina Ainciburu, Jonathan Good, Jenny Noel, Martin A Villanueva, Charles P Couturier, Alex K Shalek, Sary F Aranki, Hari R Mallidi and 3 more

Open access · goldAbstract read
In one paragraph

Article in Frontiers in immunology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
1.5field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 15 citations in OpenAlex.

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  7. Myeloid cells meet CD8Chinese journal of cancer research = Chung-kuo yen cheng yen chiu · 2024
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 6 institutions in 2 countries.

Erica A K DePasqualeDivision of Hematology, Brigham and Women's Hospital, Boston, MA, United States.
Daniel SsoziDivision of Hematology, Brigham and Women's Hospital, Boston, MA, United States.
Marina AinciburuHemato-Oncology Program, Centro de Investigación Médica Aplicada (CIMA), Universidad de Navarra, Instituto de Investigación Sanitaria de Navarra (IDISNA), Pamplona, Spain.
Jonathan GoodDivision of Hematology, Brigham and Women's Hospital, Boston, MA, United States.
Jenny NoelDivision of Hematology, Brigham and Women's Hospital, Boston, MA, United States.
Martin A VillanuevaBroad Institute of MIT and Harvard, Cambridge, MA, United States.
Charles P CouturierBroad Institute of MIT and Harvard, Cambridge, MA, United States.
Alex K ShalekBroad Institute of MIT and Harvard, Cambridge, MA, United States.
Sary F ArankiDivision of Thoracic and Cardiac Surgery, Brigham and Women's Hospital, Boston, MA, United States.
Hari R MallidiDivision of Thoracic and Cardiac Surgery, Brigham and Women's Hospital, Boston, MA, United States.
Gabriel K GriffinBroad Institute of MIT and Harvard, Cambridge, MA, United States.
Andrew A LaneDepartment of Medicine, Harvard Medical School, Boston, MA, United States.
Peter van GalenDivision of Hematology, Brigham and Women's Hospital, Boston, MA, United States.
Broad Institute · USBrigham and Women's Hospital · USHarvard University · USDana-Farber Cancer Institute · USHarvard–MIT Division of Health Sciences and Technology · USUniversidad de Navarra · ES

Funding

Targeting blastic plasmacytoid dendritic cell neoplasm (BPDCN)R37CA225191 · NCI · DANA-FARBER CANCER INST · PI LANE, ANDREW A · 2018 to 2024
$3.0M
The role of epigenetic plasticity in acute myeloid leukemia cell persistenceR00CA218832 · NCI · BRIGHAM AND WOMEN'S HOSPITAL · PI VAN GALEN, PETER · 2019 to 2021
$747k
NCI NIH HHS R00 CA218832NCI NIH HHS R37 CA225191
6 · The paper itself

Abstract

The immune system represents a major barrier to cancer progression, driving the evolution of immunoregulatory interactions between malignant cells and T-cells in the tumor environment. Blastic plasmacytoid dendritic cell neoplasm (BPDCN), a rare acute leukemia with plasmacytoid dendritic cell (pDC) differentiation, provides a unique opportunity to study these interactions. pDCs are key producers of interferon alpha (IFNA) that play an important role in T-cell activation at the interface between the innate and adaptive immune system. To assess how uncontrolled proliferation of malignant BPDCN cells affects the tumor environment, we catalog immune cell heterogeneity in the bone marrow (BM) of five healthy controls and five BPDCN patients by analyzing 52,803 single-cell transcriptomes, including 18,779 T-cells. We test computational techniques for robust cell type classification and find that T-cells in BPDCN patients consistently upregulate interferon alpha (IFNA) response and downregulate tumor necrosis factor alpha (TNFA) pathways. Integrating transcriptional data with T-cell receptor sequencing

Indexed as

Myeloproliferative DisordersSkin NeoplasmsDendritic CellsHumansInterferon-alphaT-LymphocytesInterferon-alphabioinformaticsBPDCNcancermultiomicssingle-cell

Identifiers

PMID35359938
PMCPMC8960171
OpenAlexW4221129990

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.