ArticlePloS one2022
Transcriptome analysis of Tamarix ramosissima leaves in response to NaCl stress.
Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.
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Who cites it
8 citing papers in PubMed.
- Article
- Transcriptome profiling reveals multiple regulatory pathways of Tamarix chinensis in response to salt stress.Plant cell reports · 2023Article
- Analysis of the main antioxidant enzymes in the roots ofFrontiers in plant science · 2023Article
- Analysis of the Antioxidant Mechanism ofAntioxidants (Basel, Switzerland) · 2022Article
- Effects of Exogenous (KGenes · 2022Article
- Effects of Exogenous Potassium (KGenes · 2022Article
- Analysis of Amino Acids in the Roots ofInternational journal of molecular sciences · 2022Article
- Transcriptome and Metabonomic Analysis ofGenes · 2022Article
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Authors and funding
6 authors.
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Abstract
Halophyte Tamarix ramosissima. Lcdcb (T. ramosissima) are known as the representative of Tamarix plants that are widely planted in salinized soil. However, molecular mechanisms towards salt tolerance and adaptation are largely rare. In this study, we carried out RNA-sequence and transcriptome analysis of T. ramosissima in response to NaCl stress, screened differentially expressed genes (DEGs) and further verified by qRT-PCR. Results showed that 105702 unigenes were spliced from the raw data of transcriptome sequencing, where 54238 unigenes were retrieved from KEGG, KOG, NR, and SwissProt. After 48 hours of NaCl treatment, the expression levels of 6374 genes were increased, and 5380 genes were decreased in leaves. After 168 hours, the expression levels of 3837 genes were up-regulated and 7808 genes were down-regulated. In particular, 8 transcription factors annotated to the KEGG Pathway were obtained, involving the WRKY and bZIP transcription family. In addition, KEGG pathway annotation showed that expression of 39 genes involved in ROS scavenging mechanisms were significantly changed, in which 21 genes were up-regulated and 18 genes were down-regulated after 48 hours as well as 15 genes were up-regulated and 24 genes were down-regulated after 168h. Simultaneously, the enzyme activities of SOD and POD were significantly enhanced under NaCl treatment, but the enzyme activity of CAT was not significantly enhanced. Moreover, WRKY, MYB and bZIP may participate in the process of salt resistance in T. ramosissima. This study provides gene resources and a theoretical basis for further molecular mechanisms of salt tolerance in T. ramosissima.
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