Evidence map›Paper›PMID 35357495›Full record

ArticlePlant physiology2022

APYRASE1/2 mediate red light-induced de-etiolation growth in Arabidopsis seedlings.

Gayani Weeraratne, Huan Wang, Tharindu P Weeraratne, Tanya Sabharwal, Han-Wei Jiang, Araceli Cantero, Greg Clark, Stanley J Roux

Open access · hybridAbstract read
In one paragraph

Article in Plant physiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 10 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Genome-wide identification and analyses ofMolecular breeding : new strategies in plant improvement · 2024
    Article
  5. ATP homeostasis and signaling in plants.Plant communications · 2024
    Review
  6. Review
  7. Role of calcium in regulating key steps in phytochrome-induced signaling pathways.Physiology and molecular biology of plants : an international journal of functional plant biology · 2023
    Review
  8. Overexpression ofInternational journal of molecular sciences · 2022
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Gayani WeeraratneDepartment of Molecular Biosciences, The University of Texas at Austin, Austin, Texas 78712, USA.ORCID 0000-0002-6031-5990
Huan WangDepartment of Molecular Biosciences, The University of Texas at Austin, Austin, Texas 78712, USA.ORCID 0000-0003-4782-988X
Tharindu P WeeraratneDepartment of Molecular Biosciences, The University of Texas at Austin, Austin, Texas 78712, USA.ORCID 0000-0002-6006-5733
Tanya SabharwalDepartment of Molecular Biosciences, The University of Texas at Austin, Austin, Texas 78712, USA.ORCID 0000-0002-7866-5585
Han-Wei JiangDepartment of Molecular Biosciences, The University of Texas at Austin, Austin, Texas 78712, USA.ORCID 0000-0002-3400-8698
Araceli CanteroDepartment of Molecular Biosciences, The University of Texas at Austin, Austin, Texas 78712, USA.ORCID 0000-0002-1011-7021
Greg ClarkDepartment of Molecular Biosciences, The University of Texas at Austin, Austin, Texas 78712, USA.ORCID 0000-0002-0070-9285
Stanley J RouxDepartment of Molecular Biosciences, The University of Texas at Austin, Austin, Texas 78712, USA.ORCID 0000-0001-7984-7105
The University of Texas at Austin · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In etiolated seedlings, red light (R) activates phytochrome and initiates signals that generate major changes at molecular and physiological levels. These changes include inhibition of hypocotyl growth and promotion of the growth of primary roots, apical hooks, and cotyledons. An earlier report showed that the sharp decrease in hypocotyl growth rapidly induced by R was accompanied by an equally rapid decrease in the transcript and protein levels of two closely related apyrases (APYs; nucleoside triphosphate-diphosphohydrolases) in Arabidopsis (Arabidopsis thaliana), APY1 and APY2, enzymes whose expression alters auxin transport and growth in seedlings. Here, we report that single knockouts of either APY inhibit R-induced promotion of the growth of primary roots, apical hooks, and cotyledons, and RNAi-induced suppression of APY1 expression in the background of apy2 inhibits R-induced apical hook opening. When R-irradiated primary roots and apical hook-cotyledons began to show a gradual increase in their growth relative to dark controls, they concurrently showed increased levels of APY protein, but in hook-cotyledon tissue, this occurred without parallel increases in their transcripts. In wild-type seedlings whose root growth is suppressed by the photosynthesis inhibitor 3-(3,4-dichlorophenyl)-1,1-dimethylurea, the R-induced increased APY expression in roots was also inhibited. In unirradiated plants, the constitutive expression of APY2 promoted both hook opening and changes in the transcript abundance of Small Auxin Upregulated RNA (SAUR), SAUR17 and SAUR50 that help mediate de-etiolation. These results provide evidence that the expression of APY1/APY2 is regulated by R and that APY1/APY2 participate in the signaling pathway by which phytochrome induces differential growth changes in different tissues of etiolated seedlings.

Indexed as

ArabidopsisPhytochromeApyraseArabidopsis ProteinsEtiolationHypocotylIndoleacetic AcidsLightSeedlingsAPY1 protein, ArabidopsisAPY2 protein, ArabidopsisApyraseArabidopsis ProteinsIndoleacetic AcidsPhytochrome

Identifiers

PMID35357495
PMCPMC9237676
OpenAlexW4221137694

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.