Evidence map›Paper›PMID 35357466›Full record

ArticleMetallomics : integrated biometal science2022

Identification of potential modifier genes in Chinese patients with Wilson disease.

Donghu Zhou, Siyu Jia, Liping Yi, Zhen Wu, Yi Song, Bei Zhang, Yanmeng Li, Xiaoxi Yang, Anjian Xu, Xiaojin Li and 10 more

Open access · hybridAbstract read
In one paragraph

Article in Metallomics : integrated biometal science, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 1 institution in 1 country.

Donghu ZhouExperimental Center, Beijing Friendship Hospital, Capital Medical University, Beijing 100050, China.ORCID 0000-0002-9507-5392
Siyu JiaExperimental Center, Beijing Friendship Hospital, Capital Medical University, Beijing 100050, China.
Liping YiLiver Research Center, Beijing Friendship Hospital, Capital Medical University, Beijing Key Laboratory of Translational Medicine on Liver Cirrhosis, Beijing, China.
Zhen WuLiver Research Center, Beijing Friendship Hospital, Capital Medical University, Beijing Key Laboratory of Translational Medicine on Liver Cirrhosis, Beijing, China.
Yi SongExperimental Center, Beijing Friendship Hospital, Capital Medical University, Beijing 100050, China.
Bei ZhangExperimental Center, Beijing Friendship Hospital, Capital Medical University, Beijing 100050, China.
Yanmeng LiExperimental Center, Beijing Friendship Hospital, Capital Medical University, Beijing 100050, China.
Xiaoxi YangExperimental Center, Beijing Friendship Hospital, Capital Medical University, Beijing 100050, China.
Anjian XuExperimental Center, Beijing Friendship Hospital, Capital Medical University, Beijing 100050, China.
Xiaojin LiExperimental Center, Beijing Friendship Hospital, Capital Medical University, Beijing 100050, China.
Wei ZhangLiver Research Center, Beijing Friendship Hospital, Capital Medical University, Beijing Key Laboratory of Translational Medicine on Liver Cirrhosis, Beijing, China.
Weijia DuanLiver Research Center, Beijing Friendship Hospital, Capital Medical University, Beijing Key Laboratory of Translational Medicine on Liver Cirrhosis, Beijing, China.
Zhenkun LiExperimental Center, Beijing Friendship Hospital, Capital Medical University, Beijing 100050, China.
Saiping QiExperimental Center, Beijing Friendship Hospital, Capital Medical University, Beijing 100050, China.
Zhibin ChenExperimental Center, Beijing Friendship Hospital, Capital Medical University, Beijing 100050, China.
Qin OuyangExperimental Center, Beijing Friendship Hospital, Capital Medical University, Beijing 100050, China.
Jidong JiaLiver Research Center, Beijing Friendship Hospital, Capital Medical University, Beijing Key Laboratory of Translational Medicine on Liver Cirrhosis, Beijing, China.
Jian HuangExperimental Center, Beijing Friendship Hospital, Capital Medical University, Beijing 100050, China.
Xiaojuan OuLiver Research Center, Beijing Friendship Hospital, Capital Medical University, Beijing Key Laboratory of Translational Medicine on Liver Cirrhosis, Beijing, China.
Hong YouExperimental Center, Beijing Friendship Hospital, Capital Medical University, Beijing 100050, China.
Capital Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The mutations in modifier genes may contribute to some inherited diseases including Wilson disease (WD). This study was designed to identify potential modifier genes that contribute to WD. A total of 10 WD patients with single or no heterozygous ATP7B mutations were recruited for whole-exome sequencing (WES). Five hundred and thirteen candidate genes, of which the genetic variants present in at least two patients, were identified. In order to clarify which proteins might be involved in copper transfer or metabolism processes, the isobaric tags for relative and absolute quantitation (iTRAQ) was performed to identify the differentially expressed proteins between normal and CuSO4-treated cell lines. Thirteen genes/proteins were identified by both WES and iTRAQ, indicating that disease-causing variants of these genes may actually contribute to the aberrant copper ion accumulation. Additionally, the c.86C > T (p.S29L) mutation in the SLC31A2 gene (coding CTR2) has a relative higher frequency in our cohort of WD patients (6/191) than reported (0.0024 in gnomAD database) in our healthy donors (0/109), and CTR2S29L leads to increased intracellular Cu concentration and Cu-induced apoptosis in cultured cell lines. In conclusion, the WES and iTRAQ approaches successfully identified several disease-causing variants in potential modifier genes that may be involved in the WD phenotype.

Indexed as

Hepatolenticular DegenerationChinaCopperCopper-Transporting ATPasesGenes, ModifierHumansMutationCopperCopper-Transporting ATPasesATP7Bcopper uptakeCTR2modifier genemutationWilson disease

Identifiers

PMID35357466
PMCPMC9154322
OpenAlexW4221074767

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.