Evidence map›Paper›PMID 35355287›Full record

ArticleThe EMBO journal2022

RNA is required for the integrity of multiple nuclear and cytoplasmic membrane-less RNP granules.

Carolyn J Decker, James M Burke, Patrick K Mulvaney, Roy Parker

Open access · hybridAbstract read
In one paragraph

Article in The EMBO journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
5.5field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 69 citations in OpenAlex.

  1. Article
  2. Article
  3. A passive protein environment offsets RNA folding energetics in cells.bioRxiv : the preprint server for biology · 2026
    Article
  4. Review
  5. Review
  6. Article
  7. Resolving Sub-Nuclear Architecture from Compartments to Functional Domains.International journal of molecular sciences · 2026
    Review
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Carolyn J DeckerDepartment of Biochemistry, University of Colorado Boulder, Boulder, CO, USA.ORCID 0000-0002-2672-8919
James M BurkeDepartment of Biochemistry, University of Colorado Boulder, Boulder, CO, USA.ORCID 0000-0002-5525-3641
Patrick K MulvaneyDepartment of Biochemistry, University of Colorado Boulder, Boulder, CO, USA.ORCID 0000-0002-4641-0385
Roy ParkerDepartment of Biochemistry, University of Colorado Boulder, Boulder, CO, USA.ORCID 0000-0002-8412-4152
Howard Hughes Medical Institute · USUniversity of Colorado Boulder · US

Funding

ImageXpress Micro Cellular Imagining and Analysis SystemS10RR026680 · NCRR · UNIVERSITY OF COLORADO · PI LIU, XUEDONG · 2011 to 2011
$380k
Determining the specificity and biological functions of widespread host mRNA degradation by RNase LF32AI145112 · NIAID · UNIVERSITY OF COLORADO · PI BURKE, JAMES M · 2019 to 2021
$200k
Howard Hughes Medical InstituteNCRR NIH HHS S10 RR026680NIAID NIH HHS F32 AI145112
6 · The paper itself

Abstract

Numerous membrane-less organelles, composed of a combination of RNA and proteins, are observed in the nucleus and cytoplasm of eukaryotic cells. These RNP granules include stress granules (SGs), processing bodies (PBs), Cajal bodies, and nuclear speckles. An unresolved question is how frequently RNA molecules are required for the integrity of RNP granules in either the nucleus or cytosol. To address this issue, we degraded intracellular RNA in either the cytosol or the nucleus by the activation of RNase L and examined the impact of RNA loss on several RNP granules. We find the majority of RNP granules, including SGs, Cajal bodies, nuclear speckles, and the nucleolus, are altered by the degradation of their RNA components. In contrast, PBs and super-enhancer complexes were largely not affected by RNA degradation in their respective compartments. RNA degradation overall led to the apparent dissolution of some membrane-less organelles, whereas others reorganized into structures with altered morphology. These findings highlight a critical and widespread role of RNA in the organization of several RNP granules.

Indexed as

Cytoplasmic GranulesRNACell MembraneCell NucleusRibonucleoproteinsRibonucleoproteinsRNAcondensatesmembrane-less organellesRNA granulesRNase LRNP granules

Identifiers

PMID35355287
PMCPMC9058542
OpenAlexW4220933565

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.