Evidence map›Paper›PMID 35354850›Full record

ArticleScientific reports2022

Transcript and blood-microbiome analysis towards a blood diagnostic tool for goats affected by Haemonchus contortus.

Yonathan Tilahun, Jessica Quijada Pinango, Felicia Johnson, Charles Lett, Kayla Smith, Terry Gipson, Malcolm McCallum, Peter Hoyt, Andrew Tritt, Archana Yadav and 2 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 13 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Yonathan TilahunSchool of Agriculture and Applied Sciences, Langston University, Langston, OK, 73050, USA. yonathan.tilahun@langston.edu.
Jessica Quijada PinangoSchool of Agriculture and Applied Sciences, Langston University, Langston, OK, 73050, USA.
Felicia JohnsonSchool of Agriculture and Applied Sciences, Langston University, Langston, OK, 73050, USA.
Charles LettSchool of Agriculture and Applied Sciences, Langston University, Langston, OK, 73050, USA.
Kayla SmithSchool of Agriculture and Applied Sciences, Langston University, Langston, OK, 73050, USA.
Terry GipsonSchool of Agriculture and Applied Sciences, Langston University, Langston, OK, 73050, USA.
Malcolm McCallumSchool of Agriculture and Applied Sciences, Langston University, Langston, OK, 73050, USA.
Peter HoytInstitute for Biosecurity and Microbial Forensics, Oklahoma State University, Stillwater, OK, 74078, USA.
Andrew TrittComputational Research Division, Lawrence Berkeley National Laboratory, Berkeley, CA, 94720, USA.
Archana YadavDepartment of Microbiology and Molecular Genetics, Oklahoma State University, Stillwater, OK, 74078, USA.
Mostafa ElshahedDepartment of Microbiology and Molecular Genetics, Oklahoma State University, Stillwater, OK, 74078, USA.
Zaisen WangSchool of Agriculture and Applied Sciences, Langston University, Langston, OK, 73050, USA.
Langston University · USOklahoma State University · USLawrence Berkeley National Laboratory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Alpine goat (Capra aegagrus hircus) is parasitized by the barber pole worm (Haemonchus contortus). Hematological parameters from transcript and metagenome analysis in the host are reflective of infestation. We explored comparisons between blood samples of control, infected, infected zoledronic acid-treated, and infected antibody (anti-γδ T cells) treated wethers under controlled conditions. Seven days post-inoculation (dpi), we identified 7,627 transcripts associated with the different treatment types. Microbiome measurements at 7 dpi revealed fewer raw read counts across all treatments and a less diverse microbial flora than at 21 dpi. This study identifies treatment specific transcripts and an increase in microflora abundance and diversity as wethers age. Further, F/B ratio reflect health, based on depression or elevation above thresholds defined by the baseline of non-infected controls. Forty Alpine wethers were studied where blood samples were collected from five goats in four treatment groups on 7 dpi and 21 dpi. Transcript and microbiome profiles were obtained using the Partek Flow (St. Louis, Missouri, USA) software suites pipelines. Inflammation comparisons were based on the Firmicutes/Bacteriodetes ratios that are calculated as well as the reduction of microbial diversity.

Indexed as

HaemonchiasisHaemonchusMicrobiotaAnimalsGoatsHematologic TestsMale

Identifiers

PMID35354850
PMCPMC8967894
OpenAlexW4220672258

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.