Evidence map›Paper›PMID 35351873›Full record

ArticleNature communications2022

Microbes contribute to setting the ocean carbon flux by altering the fate of sinking particulates.

Trang T H Nguyen, Emily J Zakem, Ali Ebrahimi, Julia Schwartzman, Tolga Caglar, Kapil Amarnath, Uria Alcolombri, François J Peaudecerf, Terence Hwa, Roman Stocker and 2 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 35 papers.

0numbers the graph read from it
0cells of the map it votes in
35citing papers in PubMed
15.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

35 citing papers in PubMed, 99 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Stochastic resilience enables particle foraging in oligotrophic marine environments.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  6. Article
  7. Hypersensitivity of chitin degradation to initial species densities due to monomer diffusion.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  8. Review
  9. Article
  10. bioRxiv : the preprint server for biology · 2025
    Article
  11. Detergent-based separation of microbes from marine particles.Applied and environmental microbiology · 2025
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Trang T H NguyenDepartment of Biological Sciences, University of Southern California, Los Angeles, CA, 90089, USA.ORCID http://orcid.org/0000-0002-4526-6879
Emily J ZakemDepartment of Biological Sciences, University of Southern California, Los Angeles, CA, 90089, USA.
Ali EbrahimiRalph M. Parsons Laboratory for Environmental Science and Engineering, Department of Civil and Environmental Engineering, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA.ORCID http://orcid.org/0000-0003-1079-7976
Julia SchwartzmanRalph M. Parsons Laboratory for Environmental Science and Engineering, Department of Civil and Environmental Engineering, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA.ORCID http://orcid.org/0000-0003-4563-4835
Tolga CaglarDepartment of Physics, University of California at San Diego, La Jolla, CA, 92093, USA.
Kapil AmarnathDepartment of Physics, University of California at San Diego, La Jolla, CA, 92093, USA.ORCID http://orcid.org/0000-0003-2589-9684
Uria AlcolombriInstitute of Environmental Engineering, Department of Civil, Environmental and Geomatic Engineering, ETH Zurich, 8093, Zurich, Switzerland.ORCID http://orcid.org/0000-0003-3561-5091
François J PeaudecerfInstitute of Environmental Engineering, Department of Civil, Environmental and Geomatic Engineering, ETH Zurich, 8093, Zurich, Switzerland.ORCID http://orcid.org/0000-0003-0295-4556
Terence HwaDepartment of Physics, University of California at San Diego, La Jolla, CA, 92093, USA.ORCID http://orcid.org/0000-0003-1837-6842
Roman StockerInstitute of Environmental Engineering, Department of Civil, Environmental and Geomatic Engineering, ETH Zurich, 8093, Zurich, Switzerland.ORCID http://orcid.org/0000-0002-3199-0508
Otto X CorderoRalph M. Parsons Laboratory for Environmental Science and Engineering, Department of Civil and Environmental Engineering, Massachusetts Institute of Technology, Cambridge, MA, 02139, USA.ORCID http://orcid.org/0000-0002-2695-270X
Naomi M LevineDepartment of Biological Sciences, University of Southern California, Los Angeles, CA, 90089, USA. n.levine@usc.edu.ORCID http://orcid.org/0000-0002-4963-0535
ETH Zurich · CHParsons (United States) · USUniversity of California San Diego · USUniversity of Southern California · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sinking particulate organic carbon out of the surface ocean sequesters carbon on decadal to millennial timescales. Predicting the particulate carbon flux is therefore critical for understanding both global carbon cycling and the future climate. Microbes play a crucial role in particulate organic carbon degradation, but the impact of depth-dependent microbial dynamics on ocean-scale particulate carbon fluxes is poorly understood. Here we scale-up essential features of particle-associated microbial dynamics to understand the large-scale vertical carbon flux in the ocean. Our model provides mechanistic insight into the microbial contribution to the particulate organic carbon flux profile. We show that the enhanced transfer of carbon to depth can result from populations struggling to establish colonies on sinking particles due to diffusive nutrient loss, cell detachment, and mortality. These dynamics are controlled by the interaction between multiple biotic and abiotic factors. Accurately capturing particle-microbe interactions is essential for predicting variability in large-scale carbon cycling.

Indexed as

Carbon CycleSeawaterCarbonCarbon

Identifiers

PMID35351873
PMCPMC8964765
OpenAlexW4220993648

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.