Evidence map›Paper›PMID 35351864›Full record

ArticleTranslational psychiatry2022

Effects of APOE4 allelic dosage on lipidomic signatures in the entorhinal cortex of aged mice.

André Miguel Miranda, Archana Ashok, Robin Barry Chan, Bowen Zhou, Yimeng Xu, Laura Beth McIntire, Estela Area-Gomez, Gilbert Di Paolo, Karen E Duff, Tiago Gil Oliveira and 1 more

Open access · goldAbstract read
In one paragraph

Article in Translational psychiatry, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed, 1 pooled it
6.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 1 synthesis or guideline pooled it, 56 citations in OpenAlex.

  1. Pooled it
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  15. Proteomic and metabolic profiling revealsbioRxiv : the preprint server for biology · 2025
    Article
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  17. Review
  18. Article
  19. Aging · 2025
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 6 institutions in 3 countries.

André Miguel MirandaLife and Health Sciences Research Institute (ICVS), School of Medicine, University of Minho, Campus Gualtar, 4710-057, Braga, Portugal.ORCID http://orcid.org/0000-0002-0175-9938
Archana AshokTaub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, 630 West 168th Street, New York, NY, 10032, USA.
Robin Barry ChanTaub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, 630 West 168th Street, New York, NY, 10032, USA.
Bowen ZhouTaub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, 630 West 168th Street, New York, NY, 10032, USA.
Yimeng XuTaub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, 630 West 168th Street, New York, NY, 10032, USA.
Laura Beth McIntireTaub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, 630 West 168th Street, New York, NY, 10032, USA.
Estela Area-GomezTaub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, 630 West 168th Street, New York, NY, 10032, USA.
Gilbert Di PaoloTaub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, 630 West 168th Street, New York, NY, 10032, USA.
Karen E DuffTaub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, 630 West 168th Street, New York, NY, 10032, USA.ORCID http://orcid.org/0000-0002-6177-868X
Tiago Gil Oliveira *Life and Health Sciences Research Institute (ICVS), School of Medicine, University of Minho, Campus Gualtar, 4710-057, Braga, Portugal. tiago@med.uminho.pt.ORCID http://orcid.org/0000-0003-0509-0562
Tal Nuriel *Taub Institute for Research on Alzheimer's Disease and the Aging Brain, Columbia University, 630 West 168th Street, New York, NY, 10032, USA. tn2283@cumc.columbia.edu.ORCID http://orcid.org/0000-0002-5252-8048
Columbia University · USCentro Hospitalar de Vila Nova de Gaia · PTColumbia University Irving Medical Center · USDenali Therapeutics (United States) · USHospital Braga · PTUK Dementia Research Institute · GB

Funding

Elucidating the Temporal, Spatial and Cellular Effects of Differential APOE Isoform ExpressionR01AG070202 · NIA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI NURIEL, TAL · 2021 to 2025
$2.8M
Investigating the cause of APOE4-associated microglial activation and its resulting neurotoxicity of tauopathy-afflicted neuronsK01AG061264 · NIA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI NURIEL, TAL · 2019 to 2023
$572k
Metabolite profiling to identify AD-relevant pathways affected by apoe variantsR21AG048408 · NIA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI DUFF, KAREN · 2014 to 2015
$458k
Profiling Pathologically Normal ApoE Variants to Identify Pathways for ADR21NS071836 · NINDS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI DUFF, KAREN · 2010 to 2011
$455k
Metabolomic/lipidomic analysis of apoE isoform effects in AD-linked brain regionsF32AG047797 · NIA · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI NURIEL, TAL · 2014 to 2016
$170k
NIA NIH HHS F32 AG047797NIA NIH HHS K01 AG061264NIA NIH HHS R01 AG070202NIA NIH HHS R21 AG048408NINDS NIH HHS R21 NS071836
6 · The paper itself

Abstract

Apolipoprotein E ε4 (APOE4) is the primary genetic risk factor for the late-onset form of Alzheimer's disease (AD). Although the reason for this association is not completely understood, researchers have uncovered numerous effects of APOE4 expression on AD-relevant brain processes, including amyloid beta (Aβ) accumulation, lipid metabolism, endosomal-lysosomal trafficking, and bioenergetics. In this study, we aimed to determine the effect of APOE4 allelic dosage on regional brain lipid composition in aged mice, as well as in cultured neurons. We performed a targeted lipidomic analysis on an AD-vulnerable brain region (entorhinal cortex; EC) and an AD-resistant brain region (primary visual cortex; PVC) from 14-15 month-old APOE3/3, APOE3/4, and APOE4/4 targeted replacement mice, as well as on neurons cultured with conditioned media from APOE3/3 or APOE4/4 astrocytes. Our results reveal that the EC possesses increased susceptibility to APOE4-associated lipid alterations compared to the PVC. In the EC, APOE4 expression showed a dominant effect in decreasing diacylglycerol (DAG) levels, and a semi-dominant, additive effect in the upregulation of multiple ceramide, glycosylated sphingolipid, and bis(monoacylglycerol)phosphate (BMP) species, lipids known to accumulate as a result of endosomal-lysosomal dysfunction. Neurons treated with conditioned media from APOE4/4 vs. APOE3/3 astrocytes showed similar alterations of DAG and BMP species to those observed in the mouse EC. Our results suggest that APOE4 expression differentially modulates regional neuronal lipid signatures, which may underlie the increased susceptibility of EC-localized neurons to AD pathology.

Indexed as

Amyloid beta-PeptidesApolipoprotein E4Entorhinal CortexGene DosageAnimalsApolipoprotein E3LipidomicsMiceAmyloid beta-PeptidesApolipoprotein E3Apolipoprotein E4

Identifiers

PMID35351864
PMCPMC8964762
OpenAlexW4220903838

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.