Evidence map›Paper›PMID 35348770›Full record

ArticlePlant physiology2022

Genetic analysis of chlorophyll synthesis and degradation regulated by BALANCE of CHLOROPHYLL METABOLISM.

Hiroshi Yamatani, Takeshi Ito, Kenji Nishimura, Tetsuya Yamada, Wataru Sakamoto, Makoto Kusaba

Open access · bronzeAbstract read
In one paragraph

Article in Plant physiology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
4.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 55 citations in OpenAlex.

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  18. Genome-Wide Identification of KiwifruitInternational journal of molecular sciences · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Hiroshi YamataniGraduate School of Integrated Sciences for Life, Hiroshima University, Hiroshima 739-8526, Japan.
Takeshi ItoGraduate School of Integrated Sciences for Life, Hiroshima University, Hiroshima 739-8526, Japan.ORCID 0000-0002-5648-1371
Kenji NishimuraInstitute of Plant Science and Resources, Okayama University, Kurashiki 710-0046, Japan.
Tetsuya YamadaGraduate School of Agriculture, Hokkaido University, Sapporo 060-8589, Japan.ORCID 0000-0001-6671-4995
Wataru SakamotoInstitute of Plant Science and Resources, Okayama University, Kurashiki 710-0046, Japan.ORCID 0000-0001-9747-5042
Makoto KusabaGraduate School of Integrated Sciences for Life, Hiroshima University, Hiroshima 739-8526, Japan.ORCID 0000-0003-1200-7640
Hiroshima University · JPOkayama University · JPHokkaido University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chlorophyll (Chl) serves a number of essential functions, capturing and converting light energy as a component of photosystem supercomplexes. Chl degradation during leaf senescence is also required for adequate degeneration of chloroplasts and salvaging of nutrients from senescent leaves. In this study, we performed genetic analysis to determine the functions of BALANCE of CHLOROPHYLL METABOLISM1 (BCM1) and BCM2, which control Chl levels by regulating synthesis and degradation, and STAY-GREEN (SGR)1 (also known as NON-YELLOWING1 [NYE1]) and SGR2, which encode Mg-dechelatase and catalyze Chl a degradation in Arabidopsis (Arabidopsis thaliana). Analysis of bcm1 bcm2 revealed that both BCM1 and BCM2 are involved in the regulation of Chl levels in presenescent leaves and Chl degradation in senescing leaves. Analysis of bcm1 bcm2 nye1 nye2 suggested that BCMs repress Chl-degrading activity in both presenescent and senescing leaves by regulating SGR activity. Furthermore, transactivation analysis and chromatin immunoprecipitation (ChIP) assay revealed that GOLDEN2-LIKE1 (GLK1), a central transcription factor regulating the expression of genes encoding photosystem-related proteins, such as light-harvesting Chl a/b-binding proteins (LHCPs), directly regulates the transcription of BCM1. LHCPs are stabilized by Chl binding, suggesting that GLKs control the amount of LHCP through transcriptional and post-translational regulation via BCM-mediated Chl-level regulation. Meanwhile, we generated a mutant of the BCM ortholog in lettuce (Lactuca sativa) by genome editing and found that it showed an early yellowing phenotype, but only a slight reduction in Chl in presenescent leaves. Thus, this study revealed a conserved but slightly diversified regulation of Chl and LHCP levels via the GLK-BCM pathway in eudicots.

Indexed as

ArabidopsisArabidopsis ProteinsChlorophyllChloroplastsGene Expression Regulation, PlantLight-Harvesting Protein ComplexesPlant LeavesTranscription FactorsArabidopsis ProteinsChlorophyllGLK1 protein, ArabidopsisLight-Harvesting Protein ComplexesTranscription Factors

Identifiers

PMID35348770
PMCPMC9070834
OpenAlexW4220778883

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.