Evidence map›Paper›PMID 35347715›Full record

ReviewJournal of child psychology and psychiatry, and allied disciplines2022

Research Review: How to interpret associations between polygenic scores, environmental risks, and phenotypes.

Jean-Baptiste Pingault, Andrea G Allegrini, Tracy Odigie, Leonard Frach, Jessie R Baldwin, Frühling Rijsdijk, Frank Dudbridge

Abstract readReview
In one paragraph

Review in Journal of child psychology and psychiatry, and allied disciplines, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed, 3 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 3 syntheses or guidelines pooled it.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Big data and psychiatry: advances, constraints and future directions.World psychiatry : official journal of the World Psychiatric Association (WPA) · 2026
    Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Polygenic scores in psychiatric research and clinical practice.Medizinische Genetik : Mitteilungsblatt des Berufsverbandes Medizinische Genetik e.V · 2026
    Article
  11. Review
  12. Observational epidemiological studies can mitigate genetic confounding with a genetic relatedness matrix.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  13. Article
  14. Indirect Genetic Effects on Alcohol Use Disorder and Nicotine Dependence.medRxiv : the preprint server for health sciences · 2026
    Article
  15. Article
  16. Article
  17. Article
  18. Autistic traits and alcohol consumption through adolescence and young adulthood.medRxiv : the preprint server for health sciences · 2025
    Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jean-Baptiste PingaultDivision of Psychology and Language Sciences, Department of Clinical, Educational and Health Psychology, University College London, London, UK.ORCID 0000-0003-2557-4716
Andrea G AllegriniDivision of Psychology and Language Sciences, Department of Clinical, Educational and Health Psychology, University College London, London, UK.ORCID 0000-0003-4048-4292
Tracy OdigieDivision of Psychology and Language Sciences, Department of Clinical, Educational and Health Psychology, University College London, London, UK.ORCID 0000-0002-2418-3265
Leonard FrachDivision of Psychology and Language Sciences, Department of Clinical, Educational and Health Psychology, University College London, London, UK.ORCID 0000-0001-6349-8772
Jessie R BaldwinDivision of Psychology and Language Sciences, Department of Clinical, Educational and Health Psychology, University College London, London, UK.ORCID 0000-0002-5703-5058
Frühling RijsdijkFaculty of Social Sciences, Anton de Kom University of Suriname, Paramaribo, Suriname.ORCID 0000-0003-4762-2803
Frank DudbridgeDepartment of Health Sciences, University of Leicester, Leicester, UK.ORCID 0000-0002-8817-8908

Funding

MRF_ MRF-160-0002-ELP-PINGAWellcome TrustWellcome Trust 215917/Z/19/Z
6 · The paper itself

Abstract

backgroundGenetic influences are ubiquitous as virtually all phenotypes and most exposures typically classified as environmental have been found to be heritable. A polygenic score summarises the associations between millions of genetic variants and an outcome in a single value for each individual. Ever lowering costs have enabled the genotyping of many samples relevant to child psychology and psychiatry research, including cohort studies, leading to the proliferation of polygenic score studies. It is tempting to assume that associations detected between polygenic scores and phenotypes in those studies only reflect genetic effects. However, such associations can reflect many pathways (e.g. via environmental mediation) and biases.

methodsHere, we provide a comprehensive overview of the many reasons why associations between polygenic scores, environmental exposures, and phenotypes exist. We include formal representations of common analyses in polygenic score studies using structural equation modelling. We derive biases, provide illustrative empirical examples and, when possible, mention steps that can be taken to alleviate those biases.

resultsStructural equation models and derivations show the many complexities arising from jointly modelling polygenic scores with environmental exposures and phenotypes. Counter-intuitive examples include that: (a) associations between polygenic scores and phenotypes may exist even in the absence of direct genetic effects; (b) associations between child polygenic scores and environmental exposures can exist in the absence of evocative/active gene-environment correlations; and (c) adjusting an exposure-outcome association for a polygenic score can increase rather than decrease bias.

conclusionsStrikingly, using polygenic scores may, in some cases, lead to more bias than not using them. Appropriately conducting and interpreting polygenic score studies thus requires researchers in child psychology and psychiatry and beyond to be versed in both epidemiological and genetic methods or build on interdisciplinary collaborations.

Indexed as

MidazolamMultifactorial InheritanceCohort StudiesEnvironmental ExposureGenetic Predisposition to DiseaseGenome-Wide Association StudyHumansPhenotypeMidazolambiasesenvironmentepidemiologyphenotypesPolygenic scores

Identifiers

PMID35347715
PMCPMC9790749

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.