Evidence map›Paper›PMID 35347272›Full record

ArticleNature nanotechnology2022

Chemical-to-mechanical molecular computation using DNA-based motors with onboard logic.

Selma Piranej, Alisina Bazrafshan, Khalid Salaita

Abstract read
In one paragraph

Article in Nature nanotechnology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Article
  2. Article
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  4. Programming DNA machines to move.Nature reviews. Chemistry · 2026
    Review
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  14. Review
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  16. Unlocking Genetic Profiles with a Programmable DNA-Powered Decoding Circuit.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2023
    Article
  17. Article
  18. Rolosense: Mechanical detection of SARS-CoV-2 using a DNA-based motor.bioRxiv : the preprint server for biology · 2023
    Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Selma PiranejDepartment of Chemistry, Emory University, Atlanta, GA, USA.
Alisina BazrafshanDepartment of Chemistry, Emory University, Atlanta, GA, USA.
Khalid SalaitaDepartment of Chemistry, Emory University, Atlanta, GA, USA. k.salaita@emory.edu.ORCID http://orcid.org/0000-0003-4138-3477

Funding

Catalytic Nanotherapies to Treat Lung DiseaseR01HL142866 · NHLBI · EMORY UNIVERSITY · PI SALAITA, KHALID S., WONGTRAKOOL, CHERRY P · 2018 to 2021
$1.7M
Molecular imaging technologies for mechanobiologyR01GM131099 · NIGMS · EMORY UNIVERSITY · PI MATTHEYSES, ALEXA LYNN, SALAITA, KHALID S. · 2019 to 2022
$1.6M
Elucidating the Biophysical Mechanisms of Notch ActivationR01GM097399 · NIGMS · EMORY UNIVERSITY · PI SALAITA, KHALID S. · 2012 to 2016
$1.6M
Developing a Bioanalytical Toolkit to Study the Mechanobiology of Juxtacrine SignalingR01GM124472 · NIGMS · EMORY UNIVERSITY · PI SALAITA, KHALID S. · 2017 to 2020
$1.5M
Rolosense: An innovative platform for automatic mobile phone readout of active SARS-CoV-2 particles (RADx-rad / SEED Administrative Supplement)U01AA029345 · NIAAA · EMORY UNIVERSITY · PI SALAITA, KHALID S. · 2021 to 2022
$1.4M
NHLBI NIH HHS R01 HL142866NIAAA NIH HHS U01 AA029345NIGMS NIH HHS R01 GM097399NIGMS NIH HHS R01 GM124472NIGMS NIH HHS R01 GM131099
6 · The paper itself

Abstract

DNA has become the biomolecule of choice for molecular computation that may one day complement conventional silicon-based processors. In general, DNA computation is conducted in individual tubes, is slow in generating chemical outputs in response to chemical inputs and requires fluorescence readout. Here, we introduce a new paradigm for DNA computation where the chemical input is processed and transduced into a mechanical output using dynamic DNA-based motors operating far from equilibrium. We show that DNA-based motors with onboard logic (DMOLs) can perform Boolean functions (NOT, YES, AND and OR) with 15 min readout times. Because DMOLs are micrometre-sized, massive arrays of DMOLs that are identical or uniquely encoded by size and refractive index can be multiplexed and perform motor-to-motor communication on the same chip. Finally, DMOL computational outputs can be detected using a conventional smartphone camera, thus transducing chemical information into the electronic domain in a facile manner, suggesting potential applications.

Indexed as

Computers, MolecularLogicDNAFluorescenceDNA

Identifiers

PMID35347272
PMCPMC9119907

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.