Evidence map›Paper›PMID 35347161›Full record

ArticleScientific reports2022

Genome wide association study of frost tolerance in wheat.

Behnaz Soleimani, Heike Lehnert, Steve Babben, Jens Keilwagen, Michael Koch, Fernando Alberto Arana-Ceballos, Yuriy Chesnokov, Tatyana Pshenichnikova, Jörg Schondelmaier, Frank Ordon and 2 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
6.1field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 32 citations in OpenAlex.

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  13. Identification of genetic loci and candidate genes underlying freezing tolerance in wheat seedlings.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
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  16. Molecular mapping of two novel cold resistance genes in common wheat by 660K SNP array.Molecular breeding : new strategies in plant improvement · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 7 institutions in 2 countries.

Behnaz SoleimaniFederal Research Centre for Cultivated Plants, Institute for Resistance Research and Stress Tolerance, Julius Kühn-Institut (JKI), Erwin-Baur-Str. 27, 06484, Quedlinburg, Germany.
Heike LehnertFederal Research Centre for Cultivated Plants, Institute for Biosafety in Plant Biotechnology, Julius Kühn-Institut (JKI), Erwin-Baur-Str. 27, 06484, Quedlinburg, Germany.
Steve BabbenInstitute of Agricultural and Nutritional Sciences, Martin Luther University Halle-Wittenberg (MLU), Betty-Heimann-Str. 5Saxony-Anhalt, 06120, Halle (Saale), Germany.
Jens KeilwagenFederal Research Centre for Cultivated Plants, Institute for Biosafety in Plant Biotechnology, Julius Kühn-Institut (JKI), Erwin-Baur-Str. 27, 06484, Quedlinburg, Germany.
Michael KochDeutsche Saatveredelung AG (DSV), Weißenburger Str. 5, 59557, Lippstadt, Nordrhein-Westfalen, Germany.
Fernando Alberto Arana-CeballosLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), Resources Genetics and Reproduction, Correnstraße 3, 06466, Seeland OT Gatersleben, Germany.
Yuriy ChesnokovAgrophysical Research Institute (AFI), Grazhdanskii prosp. 14, 195220, St. Petersburg, Russia.
Tatyana PshenichnikovaInstitute of Cytology and Genetics of Siberian Branch of the Russian Academy of Sciences, Prospekt Lavrentyeva, 10 630090, Novosibirsk, Russia.
Jörg SchondelmaierSaaten-Union Biotec GmbH, Hovedisser Str. 94, 33818, Leopoldshoehe, Nordrhein-Westfalen, Germany.
Frank OrdonFederal Research Centre for Cultivated Plants, Institute for Resistance Research and Stress Tolerance, Julius Kühn-Institut (JKI), Erwin-Baur-Str. 27, 06484, Quedlinburg, Germany.
Andreas BörnerLeibniz Institute of Plant Genetics and Crop Plant Research (IPK), Resources Genetics and Reproduction, Correnstraße 3, 06466, Seeland OT Gatersleben, Germany.
Dragan PerovicFederal Research Centre for Cultivated Plants, Institute for Resistance Research and Stress Tolerance, Julius Kühn-Institut (JKI), Erwin-Baur-Str. 27, 06484, Quedlinburg, Germany. dragan.perovic@julius-kuehn.de.
Julius Kühn-Institut · DELeibniz-Institut für Pflanzengenetik und Kulturpflanzenforschung (IPK) · DEAgrophysical Research Institute · RUInstitute of Cytology and Genetics · RULufthansa (Germany) · DEMartin Luther University Halle-Wittenberg · DESaaten Union (Germany) · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Winter wheat growing areas in the Northern hemisphere are regularly exposed to heavy frost. Due to the negative impact on yield, the identification of genetic factors controlling frost tolerance (FroT) and development of tools for breeding is of prime importance. Here, we detected QTL associated with FroT by genome wide association studies (GWAS) using a diverse panel of 276 winter wheat genotypes that was phenotyped at five locations in Germany and Russia in three years. The panel was genotyped using the 90 K iSelect array and SNPs in FroT candidate genes. In total, 17,566 SNPs were used for GWAS resulting in the identification of 53 markers significantly associated (LOD ≥ 4) to FroT, corresponding to 23 QTL regions located on 11 chromosomes (1A, 1B, 2A, 2B, 2D, 3A, 3D, 4A, 5A, 5B and 7D). The strongest QTL effect confirmed the importance of chromosome 5A for FroT. In addition, to our best knowledge, eight FroT QTLs were discovered for the first time in this study comprising one QTL on chromosomes 3A, 3D, 4A, 7D and two on chromosomes 1B and 2D. Identification of novel FroT candidate genes will help to better understand the FroT mechanism in wheat and to develop more effective combating strategies.

Indexed as

Genome-Wide Association StudyTriticumPhenotypePlant BreedingQuantitative Trait Loci

Identifiers

PMID35347161
PMCPMC8960795
OpenAlexW4221118793

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.