ArticleBioMed research international2022
Mitochondrial Haplogroup Classification of Ancient DNA Samples Using Haplotracker.
Article in BioMed research international, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.
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Who cites it
2 citing papers in PubMed.
- Haplogrep 3 - an interactive haplogroup classification and analysis platform.Nucleic acids research · 2023Article
- HaploCart: Human mtDNA haplogroup classification using a pangenomic reference graph.PLoS computational biology · 2023Article
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Authors and funding
3 authors.
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Abstract
Mitochondrial DNA haplogroup classification is used to study maternal lineage of ancient human populations. The haplogrouping of ancient DNA is not easy because the DNA is usually found in small pieces in limited quantities. We have developed Haplotracker, a straightforward and efficient high-resolution haplogroup classification tool optimized specifically for ancient DNA samples. Haplotracker offers a user-friendly input interface for multiple mitochondrial DNA sequence fragments in a sample. It provides accurate haplogroup classification with full-length mitochondrial genome sequences and provides high-resolution haplogroup predictions for some fragmented control region sequences using a novel algorithm built on Phylotree mtDNA Build 17 (Phylotree) and our haplotype database (
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