Evidence map›Paper›PMID 35341303›Full record

ArticlePhilosophical transactions. Series A, Mathematical, physical, and engineering sciences2022

Simulations of molecular photodynamics in long timescales.

Saikat Mukherjee, Max Pinheiro, Baptiste Demoulin, Mario Barbatti

Abstract read
In one paragraph

Article in Philosophical transactions. Series A, Mathematical, physical, and engineering sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. OH-Formation following vibrationally induced reaction dynamics of HPhysical chemistry chemical physics : PCCP · 2024
    Article
  6. Article
  7. Nonadiabatic Forward Flux Sampling for Excited-State Rare Events.Journal of chemical theory and computation · 2023
    Article
  8. Article
  9. Article
  10. Chemistry without the Born-Oppenheimer approximation.Philosophical transactions. Series A, Mathematical, physical, and engineering sciences · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Saikat MukherjeeAix Marseille University, CNRS, ICR, Marseille, France.ORCID 0000-0002-0025-4735
Max PinheiroAix Marseille University, CNRS, ICR, Marseille, France.ORCID 0000-0002-5120-4172
Baptiste DemoulinAix Marseille University, CNRS, ICR, Marseille, France.ORCID 0000-0002-6689-3919
Mario BarbattiAix Marseille University, CNRS, ICR, Marseille, France.ORCID 0000-0001-9336-6607

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Nonadiabatic dynamics simulations in the long timescale (much longer than 10 ps) are the next challenge in computational photochemistry. This paper delimits the scope of what we expect from methods to run such simulations: they should work in full nuclear dimensionality, be general enough to tackle any type of molecule and not require unrealistic computational resources. We examine the main methodological challenges we should venture to advance the field, including the computational costs of the electronic structure calculations, stability of the integration methods, accuracy of the nonadiabatic dynamics algorithms and software optimization. Based on simulations designed to shed light on each of these issues, we show how machine learning may be a crucial element for long time-scale dynamics, either as a surrogate for electronic structure calculations or aiding the parameterization of model Hamiltonians. We show that conventional methods for integrating classical equations should be adequate to extended simulations up to 1 ns and that surface hopping agrees semiquantitatively with wave packet propagation in the weak-coupling regime. We also describe our optimization of the Newton-X program to reduce computational overheads in data processing and storage. This article is part of the theme issue 'Chemistry without the Born-Oppenheimer approximation'.

Indexed as

computational chemistrydynamics simulationsexcited statesnonadiabatic phenomenaphotochemistrytheoretical chemistry

Identifiers

PMID35341303
PMCPMC8958277

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.