Evidence map›Paper›PMID 35340866›Full record

ArticleChronic stress (Thousand Oaks, Calif.)

A Novel Approach to Link Genetics and Human MRI Identifies AKAP7-Dependent Subicular/Prefrontal Functional Connectivity as Altered in Suicidality.

Guillermo Poblete, Tien Nguyen, Savannah Gosnell, Olutayo Sofela, Michelle Patriquin, Sanjay J Mathew, Alan Swann, David A Nielsen, Thomas R Kosten, Ramiro Salas

Open access · goldAbstract read
In one paragraph

Article in Chronic stress (Thousand Oaks, Calif.). The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed, 1 pooled it
0.9field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 1 synthesis or guideline pooled it, 8 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Guillermo PobleteThe Menninger Clinic, Houston, TX, USA.
Tien NguyenRice University, Houston, TX, USA.
Savannah GosnellBaylor College of Medicine, Houston, TX, USA.
Olutayo SofelaBaylor College of Medicine, Houston, TX, USA.
Michelle PatriquinThe Menninger Clinic, Houston, TX, USA.
Sanjay J MathewThe Menninger Clinic, Houston, TX, USA.ORCID https://orcid.org/0000-0002-2715-6641
Alan SwannBaylor College of Medicine, Houston, TX, USA.
David A NielsenBaylor College of Medicine, Houston, TX, USA.
Thomas R KostenBaylor College of Medicine, Houston, TX, USA.
Ramiro SalasThe Menninger Clinic, Houston, TX, USA.ORCID https://orcid.org/0000-0002-1105-566X
Michael E. DeBakey VA Medical Center · USBaylor College of Medicine · USRice University · USUniversidad de Buenos Aires · AR

Funding

Brain connectivity and genetics as predictors of opioid abuse treatment outcomesI01CX001937 · VA · MICHAEL E DEBAKEY VA MEDICAL CENTER · PI SALAS, RAMIRO · 2021 to 2025
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CSRD VA I01 CX000994CSRD VA I01 CX001937
6 · The paper itself

Abstract

Background: Brain imaging and genetics are fields acquiring data at increasing speed, but more information does not always result in a better understanding of the underlying biology. We developed the ProcessGeneLists (PGL) approach to use genetics and mRNA gene expression data to generate regions of interest for imaging studies. Methods: We applied PGL to past suicide attempt (ATT): We averaged the mRNA expression levels of genes (n = 130) possibly associated with ATT (p ≤ 10 Results: PGL revealed 8 regions where "attempt-related genes" were differentially expressed (Wilcoxon test with Bonferroni correction 8.88 Conclusion: PGL uncovered a brain function/genotype interaction in ATT by using published GWAS data to inform imaging studies. This could inform individualized therapies in the future.

Indexed as

AKAP-7dorsolateral prefrontal cortexhabenularesting state functional connectivitysubiculumsuicide

Identifiers

PMID35340866
PMCPMC8941704
OpenAlexW4221131414

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.