Evidence map›Paper›PMID 35340073›Full record

ArticleThe Plant journal : for cell and molecular biology2022

Knock-down of gene expression throughout meiosis and pollen formation by virus-induced gene silencing in Arabidopsis thaliana.

Vanesa Calvo-Baltanás, Joke De Jaeger-Braet, Wei Yuan Cher, Nils Schönbeck, Eunyoung Chae, Arp Schnittger, Erik Wijnker

Open access · hybridAbstract read
In one paragraph

Article in The Plant journal : for cell and molecular biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.1field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Review
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 3 countries.

Vanesa Calvo-BaltanásLaboratory of Genetics, Wageningen University & Research, Droevendaalsesteeg 1, Wageningen, 6700 AA, the Netherlands.ORCID 0000-0003-1348-8503
Joke De Jaeger-BraetDepartment of Developmental Biology, Institut für Pflanzenwissenschaften und Mikrobiologie, University of Hamburg, Ohnhorststrasse 18, Hamburg, 22609, Germany.
Wei Yuan CherA*STAR, Institute of Molecular and Cell Biology (IMCB), 61 Biopolis Drive, Proteos, 138673, Singapore.
Nils SchönbeckDepartment of Developmental Biology, Institut für Pflanzenwissenschaften und Mikrobiologie, University of Hamburg, Ohnhorststrasse 18, Hamburg, 22609, Germany.
Eunyoung ChaeDepartment of Biological Sciences, National University of Singapore, 14 Science Drive 4, Singapore, 117543, Singapore.ORCID 0000-0002-0889-9837
Arp SchnittgerDepartment of Developmental Biology, Institut für Pflanzenwissenschaften und Mikrobiologie, University of Hamburg, Ohnhorststrasse 18, Hamburg, 22609, Germany.
Erik WijnkerLaboratory of Genetics, Wageningen University & Research, Droevendaalsesteeg 1, Wageningen, 6700 AA, the Netherlands.ORCID 0000-0002-9872-954X
Universität Hamburg · DEAgency for Science, Technology and Research · SGNational University of Singapore · SGWageningen University & Research · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Through the inactivation of genes that act during meiosis it is possible to direct the genetic make-up of plants in subsequent generations and optimize breeding schemes. Offspring may show higher recombination of parental alleles resulting from elevated crossover (CO) incidence, or by omission of meiotic divisions, offspring may become polyploid. However, stable mutations in genes essential for recombination, or for either one of the two meiotic divisions, can have pleiotropic effects on plant morphology and line stability, for instance by causing lower fertility. Therefore, it is often favorable to temporarily change gene expression during meiosis rather than relying on stable null mutants. It was previously shown that virus-induced gene silencing (VIGS) can be used to transiently reduce CO frequencies. We asked if VIGS could also be used to modify other processes throughout meiosis and during pollen formation in Arabidopsis thaliana. Here, we show that VIGS-mediated knock-down of FIGL1, RECQ4A/B, OSD1 and QRT2 can induce (i) an increase in chiasma numbers, (ii) unreduced gametes and (iii) pollen tetrads. We further show that VIGS can target both sexes and different genetic backgrounds and can simultaneously silence different gene copies. The successful knock-down of these genes in A. thaliana suggests that VIGS can be exploited to manipulate any process during or shortly after meiosis. Hence, the transient induction of changes in inheritance patterns can be used as a powerful tool for applied research and biotechnological applications.

Indexed as

ArabidopsisArabidopsis ProteinsATPases Associated with Diverse Cellular ActivitiesGene ExpressionGene SilencingMeiosisMicrotubule-Associated ProteinsPlant BreedingPollenArabidopsis ProteinsATPases Associated with Diverse Cellular ActivitiesFIGL1 protein, ArabidopsisMicrotubule-Associated ProteinsArabidopsis thalianaincrease of crossover recombinationmeiosispollen tetradsunreduced gametesvirus-induced gene silencing

Identifiers

PMID35340073
PMCPMC9543169
OpenAlexW4221007417

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.