Evidence map›Paper›PMID 35338852›Full record

ArticleStructure (London, England : 1993)2022

Deamidation of the human eye lens protein γS-crystallin accelerates oxidative aging.

Brenna Norton-Baker, Pedram Mehrabi, Ashley O Kwok, Kyle W Roskamp, Megan A Rocha, Marc A Sprague-Piercy, David von Stetten, R J Dwayne Miller, Rachel W Martin

Open access · greenAbstract read
In one paragraph

Article in Structure (London, England : 1993), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 31 papers.

0numbers the graph read from it
0cells of the map it votes in
31citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

31 citing papers in PubMed, 31 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 3 countries.

Brenna Norton-BakerDepartment of Chemistry, University of California, Irvine, CA 92697-2025, USA; Department for Atomically Resolved Dynamics, Max-Planck-Institute for Structure and Dynamics of Matter, Luruper Chaussee 149, 22761 Hamburg, Germany.
Pedram MehrabiDepartment for Atomically Resolved Dynamics, Max-Planck-Institute for Structure and Dynamics of Matter, Luruper Chaussee 149, 22761 Hamburg, Germany; Institute for Nanostructure and Solid-State Physics, Universität Hamburg, HARBOR, Luruper Chaussee 149, 22761 Hamburg, Germany.
Ashley O KwokDepartment of Chemistry, University of California, Irvine, CA 92697-2025, USA.
Kyle W RoskampDepartment of Chemistry, University of California, Irvine, CA 92697-2025, USA.
Megan A RochaDepartment of Chemistry, University of California, Irvine, CA 92697-2025, USA.
Marc A Sprague-PiercyDepartment of Molecular Biology and Biochemistry, University of California, Irvine, CA 92697-3900, USA.
David von StettenEuropean Molecular Biology Laboratory, Hamburg Unit C/O Deutsches Elektronen-Synchrotron, Hamburg, Germany.
R J Dwayne MillerDepartments of Chemistry and Physics, University of Toronto, 80 St. George Street, Toronto, ON M5S 3H6, Canada.
Rachel W MartinDepartment of Chemistry, University of California, Irvine, CA 92697-2025, USA; Department of Molecular Biology and Biochemistry, University of California, Irvine, CA 92697-3900, USA. Electronic address: rwmartin@uci.edu.
University of California, Irvine · USMax Planck Institute for the Structure and Dynamics of Matter · DEDeutsches Elektronen-Synchrotron DESY · DEUniversity of Toronto · CA

Funding

User Training and OutreachP30GM124169 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI Gregory L Hura · 2017 to 2026
$28.6M
Solid-state NMR methods for investigating native and aggregated eye lens proteinsR01EY021514 · NEI · UNIVERSITY OF CALIFORNIA-IRVINE · PI MARTIN, RACHEL WAGNER · 2011 to 2022
$2.8M
Purchase of a Multi-Angle Light Scattering System with Integrated Size Exclusion ChromatographyS10OD021594 · OD · UNIVERSITY OF CALIFORNIA-IRVINE · PI MARTIN, RACHEL WAGNER · 2016 to 2016
$139k
Howard Hughes Medical InstituteNEI NIH HHS R01 EY021514NIGMS NIH HHS P30 GM124169NIH HHS S10 OD021594
6 · The paper itself

Abstract

Cataract, a clouding of the eye lens from protein precipitation, affects millions of people every year. The lens proteins, the crystallins, show extensive post-translational modifications (PTMs) in cataractous lenses. The most common PTMs, deamidation and oxidation, promote crystallin aggregation; however, it is not clear precisely how these PTMs contribute to crystallin insolubilization. Here, we report six crystal structures of the lens protein γS-crystallin (γS): one of the wild-type and five of deamidated γS variants, from three to nine deamidation sites, after sample aging. The deamidation mutations do not change the overall fold of γS; however, increasing deamidation leads to accelerated disulfide-bond formation. Addition of deamidated sites progressively destabilized protein structure, and the deamidated variants display an increased propensity for aggregation. These results suggest that the deamidated variants are useful as models for accelerated aging; the structural changes observed provide support for redox activity of γS-crystallin in the lens.

Indexed as

Cataractgamma-CrystallinsLens, CrystallineHumansOxidation-ReductionOxidative Stressgamma-Crystallinscataractcrystallindeamidationdisulfide bondingoxidationpost-translational modificationprotein aggregationprotein stabilitysecond virial coefficientX-ray crystallography

Identifiers

PMID35338852
PMCPMC9081212
OpenAlexW4221104148

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.