Evidence map›Paper›PMID 35336834›Full record

ArticleBiology2022

Spatial Metagenomic Analysis in Understanding the Microbial Diversity of Thar Desert.

Jagdish Parihar, Suraj P Parihar, Prashanth Suravajhala, Ashima Bagaria

Abstract read
In one paragraph

Article in Biology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jagdish PariharDepartment of Physics, Manipal University Jaipur, Jaipur 303007, India.ORCID 0000-0002-7699-1985
Suraj P PariharWellcome Centre for Infectious Diseases Research in Africa (CIDRI-Africa), Institute of Infectious Diseases and Molecular Medicine (IDM), Division of Medical Microbiology, Faculty of Health Sciences, University of Cape Town, Private Bag X3, Rondebosch, Cape Town 7701, South Africa.ORCID 0000-0002-4932-7990
Prashanth SuravajhalaBioclues.org, Vivekananda Nagar, Kukatpally, Hyderabad 500072, India.ORCID 0000-0002-8535-278X
Ashima BagariaDepartment of Physics, Manipal University Jaipur, Jaipur 303007, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The arid and semi-arid regions of Rajasthan are one of the most extreme biomes of India, possessing diverse microbial communities that exhibit immense biotechnological potential for industries. Herein, we sampled study sites from arid and semi-arid regions of Thar Desert, Rajasthan, India and subjected them to chemical, physical and metagenomics analysis. The microbial diversity was studied using V3-V4 amplicon sequencing of 16S rRNA gene by Illumina MiSeq. Our metagenomic analyses revealed that the sampled sites consist mainly of Proteobacteria (19-31%) followed by unclassified bacteria (5-21%), Actinobacteria (3-25%), Planctomycetes (5-13%), Chloroflexi (2-14%), Bacteroidetes (3-12%), Firmicutes (3-7%), Acidobacteria (1-4%) and Patescibacteria (1-4%). We have found Proteobacteria in abundance which is associated with a range of activities involved in biogeochemical cycles such as carbon, nitrogen, and sulphur. Our study is perhaps the first of its kind to explore soil bacteria from arid and semi-arid regions of Rajasthan, India. We believe that the new microbial candidates found can be further explored for various industrial and biotechnological applications.

Indexed as

evolutionary taxonomyextremophilesmetagenomicsmicrobial diversitysoil bacteria

Identifiers

PMID35336834
PMCPMC8945486

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.