Evidence map›Paper›PMID 35333891›Full record

ArticlePloS one2022

Prediction of malignant transformation in oral epithelial dysplasia using infrared absorbance spectra.

Barnaby G Ellis, Conor A Whitley, Asterios Triantafyllou, Philip J Gunning, Caroline I Smith, Steve D Barrett, Peter Gardner, Richard J Shaw, Peter Weightman, Janet M Risk

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
4.0field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Barnaby G EllisDepartment of Physics, University of Liverpool, Liverpool, United Kingdom.
Conor A WhitleyDepartment of Physics, University of Liverpool, Liverpool, United Kingdom.
Asterios TriantafyllouDepartment of Pathology, Liverpool Clinical Laboratories, University of Liverpool, Liverpool, United Kingdom.
Philip J GunningDepartment of Molecular and Clinical Cancer Medicine, Institute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool, United Kingdom.
Caroline I SmithDepartment of Physics, University of Liverpool, Liverpool, United Kingdom.ORCID 0000-0001-6878-0697
Steve D BarrettDepartment of Physics, University of Liverpool, Liverpool, United Kingdom.
Peter GardnerManchester Institute of Biotechnology, University of Manchester, Manchester, United Kingdom.
Richard J ShawDepartment of Molecular and Clinical Cancer Medicine, Institute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool, United Kingdom.
Peter WeightmanDepartment of Physics, University of Liverpool, Liverpool, United Kingdom.
Janet M RiskDepartment of Molecular and Clinical Cancer Medicine, Institute of Systems, Molecular and Integrative Biology, University of Liverpool, Liverpool, United Kingdom.
University of Liverpool · GBUniversity of Manchester · GB

Funding

Cancer Research UK C7738/A26196
6 · The paper itself

Abstract

Oral epithelial dysplasia (OED) is a histopathologically-defined, potentially premalignant condition of the oral cavity. The rate of transformation to frank carcinoma is relatively low (12% within 2 years) and prediction based on histopathological grade is unreliable, leading to both over- and under-treatment. Alternative approaches include infrared (IR) spectroscopy, which is able to classify cancerous and non-cancerous tissue in a number of cancers, including oral. The aim of this study was to explore the capability of FTIR (Fourier-transform IR) microscopy and machine learning as a means of predicting malignant transformation of OED. Supervised, retrospective analysis of longitudinally-collected OED biopsy samples from 17 patients with high risk OED lesions: 10 lesions transformed and 7 did not over a follow-up period of more than 3 years. FTIR spectra were collected from routine, unstained histopathological sections and machine learning used to predict malignant transformation, irrespective of OED classification. PCA-LDA (principal component analysis followed by linear discriminant analysis) provided evidence that the subsequent transforming status of these 17 lesions could be predicted from FTIR data with a sensitivity of 79 ± 5% and a specificity of 76 ± 5%. Six key wavenumbers were identified as most important in this classification. Although this pilot study used a small cohort, the strict inclusion criteria and classification based on known outcome, rather than OED grade, make this a novel study in the field of FTIR in oral cancer and support the clinical potential of this technology in the surveillance of OED.

Indexed as

Mouth NeoplasmsPrecancerous ConditionsCell Transformation, NeoplasticHumansHyperplasiaPilot ProjectsRetrospective StudiesSpectroscopy, Fourier Transform Infrared

Identifiers

PMID35333891
PMCPMC8956195
OpenAlexW4220904653

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.