Evidence map›Paper›PMID 35331167›Full record

ArticleBMC nephrology2022

Proteomic signature of tubulointerstitial tissue predicts prognosis in IgAN.

Flavia Teodora Ioana Paunas, Kenneth Finne, Sabine Leh, Hans-Peter Marti, Frode Berven, Bjørn Egil Vikse

Open access · goldAbstract read
In one paragraph

Article in BMC nephrology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed, 1 pooled it
1.3field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 1 synthesis or guideline pooled it, 8 citations in OpenAlex.

  1. Pooled it
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Flavia Teodora Ioana PaunasDepartment of Medicine, Haugesund Hospital, Haugesund, Norway. flavia_paunas@yahoo.com.
Kenneth FinneDepartment of Clinical Medicine, University of Bergen, Bergen, Norway.
Sabine LehDepartment of Clinical Medicine, University of Bergen, Bergen, Norway.
Hans-Peter MartiDepartment of Clinical Medicine, University of Bergen, Bergen, Norway.
Frode BervenDepartment of Biomedicine, University of Bergen, Bergen, Norway.
Bjørn Egil VikseDepartment of Medicine, Haugesund Hospital, Haugesund, Norway.
University of Bergen · NOPrivatsykehuset Haugesund · NO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundIgA nephropathy (IgAN) is associated with a significant risk of progression to kidney failure. Tubular atrophy is an established important risk factor for progressive disease, but few studies have investigated tubulointerstitial molecular markers and mechanisms of progression in IgAN.

methodsBased on data from the Norwegian Renal Registry, two groups were included: IgAN patients with (n = 9) or without (n = 18) progression to kidney failure during 10 years of follow-up. Tubulointerstitial tissue without discernible interstitial expansion or pronounced tubular alterations was microdissected, proteome was analysed using tandem mass spectrometry and relative protein abundances were compared between groups.

resultsProteome analyses quantified 2562 proteins with at least 2 unique peptides. Of these, 150 proteins had significantly different abundance between progressive and non-progressive IgAN patients, 67 were more abundant and 83 less abundant. Periostin was the protein with the highest fold change between progressive and non-progressive IgAN (fold change 8.75, p < 0.05) and periostin staining was also stronger in patients with progressive vs non-progressive IgAN. Reactome pathway analyses showed that proteins related to inflammation were more abundant and proteins involved in mitochondrial translation were significantly less abundant in progressive vs non-progressive patients.

conclusionsMicrodissection of tubulointerstitial tissue with only mild damage allowed for identification of proteome markers of early progressive IgAN. Periostin abundance showed promise as a novel and important risk marker of progression.

Indexed as

Glomerulonephritis, IGARenal InsufficiencyBiomarkersDisease ProgressionFemaleHumansMalePrognosisProteomeProteomicsBiomarkersProteomeESRDFormalin-fixed paraffin embedded kidney biopsy tissueIgA nephropathyLiquid chromatography–tandem mass spectrometryProteomic analysesTubulointerstitium

Identifiers

PMID35331167
PMCPMC8943973
OpenAlexW4225808292

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.