Evidence map›Paper›PMID 35330687›Full record

ArticleiScience2022

Histone deacetylation regulates nucleotide excision repair through an interaction with the XPC protein.

Masayuki Kusakabe, Erina Kakumu, Fumika Kurihara, Kazuki Tsuchida, Takumi Maeda, Haruto Tada, Kanako Kusao, Akari Kato, Takeshi Yasuda, Tomonari Matsuda and 4 more

Abstract read
In one paragraph

Article in iScience, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Review
  2. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Masayuki KusakabeBiosignal Research Center, Kobe University, Kobe 657-8501, Japan.
Erina KakumuBiosignal Research Center, Kobe University, Kobe 657-8501, Japan.
Fumika KuriharaBiosignal Research Center, Kobe University, Kobe 657-8501, Japan.
Kazuki TsuchidaBiosignal Research Center, Kobe University, Kobe 657-8501, Japan.
Takumi MaedaBiosignal Research Center, Kobe University, Kobe 657-8501, Japan.
Haruto TadaBiosignal Research Center, Kobe University, Kobe 657-8501, Japan.
Kanako KusaoBiosignal Research Center, Kobe University, Kobe 657-8501, Japan.
Akari KatoBiosignal Research Center, Kobe University, Kobe 657-8501, Japan.
Takeshi YasudaInstitute for Quantum Life Science, National Institutes for Quantum Science and Technology, Chiba 263-8555, Japan.
Tomonari MatsudaResearch Center for Environmental Quality Management, Graduate School of Engineering, Kyoto University, Otsu 520-0811, Japan.
Mitsuyoshi NakaoInstitute of Molecular Embryology and Genetics, Kumamoto University, Kumamoto 860-0811, Japan.
Masayuki YokoiBiosignal Research Center, Kobe University, Kobe 657-8501, Japan.
Wataru SakaiBiosignal Research Center, Kobe University, Kobe 657-8501, Japan.
Kaoru SugasawaBiosignal Research Center, Kobe University, Kobe 657-8501, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The XPC protein complex plays a central role in DNA lesion recognition for global genome nucleotide excision repair (GG-NER). Lesion recognition can be accomplished in either a UV-DDB-dependent or -independent manner; however, it is unclear how these sub-pathways are regulated in chromatin. Here, we show that histone deacetylases 1 and 2 facilitate UV-DDB-independent recruitment of XPC to DNA damage by inducing histone deacetylation. XPC localizes to hypoacetylated chromatin domains in a DNA damage-independent manner, mediated by its structurally disordered middle (M) region. The M region interacts directly with the N-terminal tail of histone H3, an interaction compromised by H3 acetylation. Although the M region is dispensable for

Indexed as

Cell biologyMolecular biologyMolecular interaction

Identifiers

PMID35330687
PMCPMC8938288

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.