Evidence map›Paper›PMID 35328582›Full record

ArticleInternational journal of molecular sciences2022

ICA1L Is Associated with Small Vessel Disease: A Proteome-Wide Association Study in Small Vessel Stroke and Intracerebral Haemorrhage.

Natalia Cullell, Cristina Gallego-Fábrega, Jara Cárcel-Márquez, Elena Muiño, Laia Llucià-Carol, Miquel Lledós, Jesús M Martín-Campos, Jessica Molina, Laura Casas, Marta Almeria and 2 more

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
2.6field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it, 22 citations in OpenAlex.

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  15. Identifying novel proteins underlying loneliness by integrating GWAS summary data with human brain proteomes.Neuropsychopharmacology : official publication of the American College of Neuropsychopharmacology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 3 institutions in 1 country.

Natalia CullellStroke Pharmacogenomics and Genetics Group, Biomedical Research Institute Sant Pau, 08041 Barcelona, Spain.
Cristina Gallego-FábregaStroke Pharmacogenomics and Genetics Group, Biomedical Research Institute Sant Pau, 08041 Barcelona, Spain.ORCID 0000-0003-3229-5512
Jara Cárcel-MárquezStroke Pharmacogenomics and Genetics Group, Biomedical Research Institute Sant Pau, 08041 Barcelona, Spain.ORCID 0000-0002-6949-0699
Elena MuiñoStroke Pharmacogenomics and Genetics Group, Biomedical Research Institute Sant Pau, 08041 Barcelona, Spain.
Laia Llucià-CarolStroke Pharmacogenomics and Genetics Group, Biomedical Research Institute Sant Pau, 08041 Barcelona, Spain.ORCID 0000-0002-7732-0665
Miquel LledósStroke Pharmacogenomics and Genetics Group, Biomedical Research Institute Sant Pau, 08041 Barcelona, Spain.ORCID 0000-0001-8832-789X
Jesús M Martín-CamposStroke Pharmacogenomics and Genetics Group, Biomedical Research Institute Sant Pau, 08041 Barcelona, Spain.ORCID 0000-0003-0414-037X
Jessica MolinaNeurology Department, Hospital Universitari MútuaTerrassa, 08221 Terrassa, Spain.
Laura CasasNeurology Department, Hospital Universitari MútuaTerrassa, 08221 Terrassa, Spain.
Marta AlmeriaNeurology Department, Hospital Universitari MútuaTerrassa, 08221 Terrassa, Spain.
Israel Fernández-CadenasStroke Pharmacogenomics and Genetics Group, Biomedical Research Institute Sant Pau, 08041 Barcelona, Spain.
Jerzy KrupinskiNeurology Department, Hospital Universitari MútuaTerrassa, 08221 Terrassa, Spain.
Mútua Terrassa · ESUniversitat Autònoma de Barcelona · ESUniversity Hospital Mútua de Terrassa · ES

Funding

Agency for Administration of University and Research 2017SGR-1427Boehringer Ingelheim Fonds SEDMANEranet-Neuron, European research grants iBioStroke projectFundació MútuaTerrassa EPIGENESISInstituto de Salud Carlos III PI17/02089Instituto de Salud Carlos III PI18/01338Instituto de Salud Carlos III PI20/00678La Marató de TV3 EPIGENESISPfizer (Spain) APHAS
6 · The paper itself

Abstract

Small vessel strokes (SVS) and intracerebral haemorrhages (ICH) are acute outcomes of cerebral small vessel disease (SVD). Genetic studies combining both phenotypes have identified three loci associated with both traits. However, the genetic cis-regulation at the protein level associated with SVD has not been studied before. We performed a proteome-wide association study (PWAS) using FUSION to integrate a genome-wide association study (GWAS) and brain proteomic data to discover the common mechanisms regulating both SVS and ICH. Dorsolateral prefrontal cortex (dPFC) brain proteomes from the ROS/MAP study (N = 376 subjects and 1443 proteins) and the summary statistics for the SVS GWAS from the MEGASTROKE study (N = 237,511) and multi-trait analysis of GWAS (MTAG)-ICH−SVS from Chung et al. (N = 240,269) were selected. We performed PWAS and then a co-localization analysis with COLOC. The significant and nominal results were validated using a replication dPFC proteome (N = 152). The replicated results (q-value < 0.05) were further investigated for the causality relationship using summary data-based Mendelian randomization (SMR). One protein (ICA1L) was significantly associated with SVS (z-score = −4.42 and p-value = 9.6 × 10−6) and non-lobar ICH (z-score = −4.8 and p-value = 1.58 × 10−6) in the discovery PWAS, with a high co-localization posterior probability of 4. In the validation PWAS, ICA1L remained significantly associated with both traits. The SMR results for ICA1L indicated a causal association of protein expression levels in the brain with SVS (p-value = 3.66 × 10−5) and non-lobar ICH (p-value = 1.81 × 10−5). Our results show that the association of ICA1L with SVS and non-lobar ICH is conditioned by the cis-regulation of its protein levels in the brain.

Indexed as

ProteomeStrokeCerebral HemorrhageGenome-Wide Association StudyHumansProteomicsProteomegenome-wide association study (GWAS)intracerebral haemorrhageproteome-wide association studyPWASsmall vessel diseasesmall vessel stroke

Identifiers

PMID35328582
PMCPMC8951240
OpenAlexW4220808103

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.