Evidence map›Paper›PMID 35328329›Full record

ArticleInternational journal of molecular sciences2022

Complex of HIV-1 Integrase with Cellular Ku Protein: Interaction Interface and Search for Inhibitors.

Ekaterina Ilgova, Simon Galkin, Maria Khrenova, Marina Serebryakova, Marina Gottikh, Andrey Anisenko

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.6field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Recent Advances in Protein-Protein Interactions.International journal of molecular sciences · 2023
    Article
  5. Complex Relationships between HIV-1 Integrase and Its Cellular Partners.International journal of molecular sciences · 2022
    Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Ekaterina IlgovaChemistry Department, Lomonosov Moscow State University, 119992 Moscow, Russia.
Simon GalkinChemistry Department, Lomonosov Moscow State University, 119992 Moscow, Russia.ORCID 0000-0003-0479-0591
Maria KhrenovaChemistry Department, Lomonosov Moscow State University, 119992 Moscow, Russia.ORCID 0000-0001-7117-3089
Marina SerebryakovaBelozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, 119992 Moscow, Russia.ORCID 0000-0002-5402-8215
Marina GottikhChemistry Department, Lomonosov Moscow State University, 119992 Moscow, Russia.
Andrey AnisenkoChemistry Department, Lomonosov Moscow State University, 119992 Moscow, Russia.ORCID 0000-0003-0590-5880
Lomonosov Moscow State University · RURussian Academy of Sciences · RU

Funding

Russian Foundation for Basic Research 18-29-08012Russian Science Foundation 19-74-10021
6 · The paper itself

Abstract

The interaction of HIV-1 integrase and the cellular Ku70 protein is necessary for HIV replication due to its positive effect on post-integration DNA repair. We have previously described in detail the Ku70 binding site within integrase. However, the integrase binding site in Ku70 remained poorly characterized. Here, using a peptide fishing assay and site-directed mutagenesis, we have identified residues I72, S73, and I76 of Ku70 as key for integrase binding. The molecular dynamics studies have revealed a possible way for IN to bind to Ku70, which is consistent with experimental data. According to this model, residues I72 and I76 of Ku70 form a "leucine zipper" with integrase residues, and, therefore, their concealment by low-molecular-weight compounds should impede the Ku70 interaction with integrase. We have identified such compounds by molecular docking and have confirmed their capacity to inhibit the formation of the integrase complex with Ku70. Our data demonstrate that the site of IN binding within Ku70 identified in the present work may be used for further search for inhibitors of the integrase binding to Ku70.

Indexed as

HIV-1HIV IntegraseKu AutoantigenMolecular Docking SimulationProtein BindingHIV IntegraseKu Autoantigenp31 integrase protein, Human immunodeficiency virus 1HIV-1integraseKu70protein–protein interactions

Identifiers

PMID35328329
PMCPMC8951179
OpenAlexW4220691667

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.