Evidence map›Paper›PMID 35328103›Full record

ArticleGenes2022

In Vitro Analysis of Biological Activity of Circulating Cell-Free DNA Isolated from Blood Plasma of Schizophrenic Patients and Healthy Controls.

Elizaveta S Ershova, Galina V Shmarina, Lev N Porokhovnik, Natalia V Zakharova, George P Kostyuk, Pavel E Umriukhin, Sergey I Kutsev, Vasilina A Sergeeva, Natalia N Veiko, Svetlana V Kostyuk

Open access · goldAbstract read
In one paragraph

Article in Genes, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it, 19 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Article
  4. Review
  5. Review
  6. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Elizaveta S ErshovaMolecular Biology Laboratory, Research Centre for Medical Genetics, 115522 Moscow, Russia.ORCID 0000-0003-1206-5832
Galina V ShmarinaMolecular Biology Laboratory, Research Centre for Medical Genetics, 115522 Moscow, Russia.ORCID 0000-0003-4851-8987
Lev N PorokhovnikMolecular Biology Laboratory, Research Centre for Medical Genetics, 115522 Moscow, Russia.ORCID 0000-0002-3664-6685
Natalia V ZakharovaN.A. Alekseev Clinical Psychiatric Hospital No. 1, 117152 Moscow, Russia.
George P KostyukN.A. Alekseev Clinical Psychiatric Hospital No. 1, 117152 Moscow, Russia.ORCID 0000-0002-3073-6305
Pavel E UmriukhinMolecular Biology Laboratory, Research Centre for Medical Genetics, 115522 Moscow, Russia.ORCID 0000-0001-8628-7353
Sergey I KutsevMolecular Biology Laboratory, Research Centre for Medical Genetics, 115522 Moscow, Russia.
Vasilina A SergeevaMolecular Biology Laboratory, Research Centre for Medical Genetics, 115522 Moscow, Russia.
Natalia N VeikoMolecular Biology Laboratory, Research Centre for Medical Genetics, 115522 Moscow, Russia.
Svetlana V KostyukMolecular Biology Laboratory, Research Centre for Medical Genetics, 115522 Moscow, Russia.
Research Centre for Medical Genetics · RUSechenov University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Schizophrenia is associated with low-grade systemic inflammation. Circulating cell-free DNA (c-cfDNA) belongs to the DAMP class. The major research question was: can the c-cfDNA of schizophrenic patients (sz-cfDNA) stimulate the DNA sensor genes, which control the innate immunity? We investigated the in vitro response of ten human skin fibroblast (HSF) lines to five DNA probes containing different amounts of a GC-rich marker (the ribosomal repeat) and a DNA oxidation marker (8-oxodG) including sz-cfDNA and healthy control c-cfDNA (hc-cfDNA) probes. After 1 h, 3 h, and 24 h of incubation, the expression of 6 protein genes responsible for cfDNA transport into the cell (EEA1 and HMGB1) and the recognition of cytosolic DNA (TLR9, AIM2, STING and RIG-I) was analyzed at the transcriptional (RT-qPCR) and protein level (flow cytometry and fluorescence microscopy). Additionally, we analyzed changes in the RNA amount of 32 genes (RT-qPCR), which had been previously associated with different cellular responses to cell-free DNA with different characteristics. Adding sz-cfDNA and hc-cfDNA to the HSF medium in equal amounts (50 ng/mL) blocked endocytosis and stimulated

Indexed as

Cell-Free Nucleic AcidsSchizophreniaCytokinesDNAHumansPlasmaToll-Like Receptor 9Cell-Free Nucleic AcidsCytokinesDNAToll-Like Receptor 9AIM2cell-free DNAEEA1HMGB1RIG-IschizophreniaSTINGTLR9

Identifiers

PMID35328103
PMCPMC8955124
OpenAlexW4220915561

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.