Evidence map›Paper›PMID 35328087›Full record

ArticleGenes2022

Identification of Genetic Risk Factors of Severe COVID-19 Using Extensive Phenotypic Data: A Proof-of-Concept Study in a Cohort of Russian Patients.

Sergey G Shcherbak, Anton I Changalidi, Yury A Barbitoff, Anna Yu Anisenkova, Sergei V Mosenko, Zakhar P Asaulenko, Victoria V Tsay, Dmitrii E Polev, Roman S Kalinin, Yuri A Eismont and 9 more

Open access · goldAbstract read
In one paragraph

Article in Genes, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

19 authors at 5 institutions in 1 country.

Sergey G ShcherbakSt. Petersburg State University, 199034 St. Petersburg, Russia.
Anton I ChangalidiSt. Petersburg State University, 199034 St. Petersburg, Russia.ORCID 0000-0003-4752-2239
Yury A BarbitoffSt. Petersburg State University, 199034 St. Petersburg, Russia.ORCID 0000-0002-3222-440X
Anna Yu AnisenkovaSt. Petersburg State University, 199034 St. Petersburg, Russia.
Sergei V MosenkoSt. Petersburg State University, 199034 St. Petersburg, Russia.ORCID 0000-0002-1357-4324
Zakhar P AsaulenkoCity Hospital No. 40, 197706 St. Petersburg, Russia.
Victoria V TsayCity Hospital No. 40, 197706 St. Petersburg, Russia.
Dmitrii E PolevCity Hospital No. 40, 197706 St. Petersburg, Russia.ORCID 0000-0001-9679-2791
Roman S KalininCity Hospital No. 40, 197706 St. Petersburg, Russia.
Yuri A EismontCity Hospital No. 40, 197706 St. Petersburg, Russia.
Andrey S GlotovSt. Petersburg State University, 199034 St. Petersburg, Russia.ORCID 0000-0002-7465-4504
Evgeny Y GarbuzovCity Hospital No. 40, 197706 St. Petersburg, Russia.
Alexander N ChernovCity Hospital No. 40, 197706 St. Petersburg, Russia.
Olga A KlitsenkoSt. Petersburg State University, 199034 St. Petersburg, Russia.
Mikhail O UshakovD.O. Ott Research Institute of Obstetrics, Gynaecology, and Reproductology, 199034 St. Petersburg, Russia.
Anton E ShikovCity Hospital No. 40, 197706 St. Petersburg, Russia.ORCID 0000-0001-7084-0177
Stanislav P UrazovCity Hospital No. 40, 197706 St. Petersburg, Russia.ORCID 0000-0002-5441-2911
Vladislav S BaranovD.O. Ott Research Institute of Obstetrics, Gynaecology, and Reproductology, 199034 St. Petersburg, Russia.
Oleg S GlotovCity Hospital No. 40, 197706 St. Petersburg, Russia.ORCID 0000-0002-0091-2224
St Petersburg University · RUCity Hospital No. 40 · RUResearch Institute of Obstetrics and Gynecology named after D.O. Ott · RUChildren's Scientific and Clinical Center for Infectious Diseases of the Federal Medical and Biological Agency · RUAll-Russian Research Institute of Agricultural Microbiology · RU

Funding

Medical Research Council MC_PC_17228Medical Research Council MC_QA137853St Petersburg University 75253103
6 · The paper itself

Abstract

The COVID-19 pandemic has drawn the attention of many researchers to the interaction between pathogen and host genomes. Over the last two years, numerous studies have been conducted to identify the genetic risk factors that predict COVID-19 severity and outcome. However, such an analysis might be complicated in cohorts of limited size and/or in case of limited breadth of genome coverage. In this work, we tried to circumvent these challenges by searching for candidate genes and genetic variants associated with a variety of quantitative and binary traits in a cohort of 840 COVID-19 patients from Russia. While we found no gene- or pathway-level associations with the disease severity and outcome, we discovered eleven independent candidate loci associated with quantitative traits in COVID-19 patients. Out of these, the most significant associations correspond to rs1651553 in

Indexed as

COVID-19Cohort StudiesGenome-Wide Association StudyHumansPandemicsPatient AcuityRisk FactorsRussiaCOVID-19deep phenotypinggenetic associationsgenetic variantsGWASNGSseverity

Identifiers

PMID35328087
PMCPMC8949130
OpenAlexW4221114888

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.