Evidence map›Paper›PMID 35328010›Full record

ArticleGenes2022

Genome-Wide Profiling of Alternative Splicing and Gene Fusion during Rice Black-Streaked Dwarf Virus Stress in Maize (

Yu Zhou, Qing Lu, Jiayue Zhang, Simeng Zhang, Jianfeng Weng, Hong Di, Lin Zhang, Xin Li, Yuhang Liang, Ling Dong and 6 more

Open access · goldAbstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Genes, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
4.2field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors at 2 institutions in 1 country.

Yu ZhouKey Laboratory of Germplasm Enhancement, Physiology and Ecology of Food Crops in Cold Region, Department of Agriculture, Northeast Agricultural University, Harbin 150030, China.ORCID 0000-0002-9748-0914
Qing LuKey Laboratory of Germplasm Enhancement, Physiology and Ecology of Food Crops in Cold Region, Department of Agriculture, Northeast Agricultural University, Harbin 150030, China.
Jiayue ZhangKey Laboratory of Germplasm Enhancement, Physiology and Ecology of Food Crops in Cold Region, Department of Agriculture, Northeast Agricultural University, Harbin 150030, China.
Simeng ZhangKey Laboratory of Germplasm Enhancement, Physiology and Ecology of Food Crops in Cold Region, Department of Agriculture, Northeast Agricultural University, Harbin 150030, China.
Jianfeng WengInstitute of Crop Science, Chinese Academy of Agricultural Sciences, Zhongguancun South Street, Haidian District, Beijing 100081, China.
Hong DiKey Laboratory of Germplasm Enhancement, Physiology and Ecology of Food Crops in Cold Region, Department of Agriculture, Northeast Agricultural University, Harbin 150030, China.
Lin ZhangKey Laboratory of Germplasm Enhancement, Physiology and Ecology of Food Crops in Cold Region, Department of Agriculture, Northeast Agricultural University, Harbin 150030, China.
Xin LiKey Laboratory of Germplasm Enhancement, Physiology and Ecology of Food Crops in Cold Region, Department of Agriculture, Northeast Agricultural University, Harbin 150030, China.
Yuhang LiangKey Laboratory of Germplasm Enhancement, Physiology and Ecology of Food Crops in Cold Region, Department of Agriculture, Northeast Agricultural University, Harbin 150030, China.
Ling DongKey Laboratory of Germplasm Enhancement, Physiology and Ecology of Food Crops in Cold Region, Department of Agriculture, Northeast Agricultural University, Harbin 150030, China.
Xing ZengKey Laboratory of Germplasm Enhancement, Physiology and Ecology of Food Crops in Cold Region, Department of Agriculture, Northeast Agricultural University, Harbin 150030, China.ORCID 0000-0002-3586-1578
Xianjun LiuKey Laboratory of Germplasm Enhancement, Physiology and Ecology of Food Crops in Cold Region, Department of Agriculture, Northeast Agricultural University, Harbin 150030, China.
Pei GuoKey Laboratory of Germplasm Enhancement, Physiology and Ecology of Food Crops in Cold Region, Department of Agriculture, Northeast Agricultural University, Harbin 150030, China.
Huilan ZhangKey Laboratory of Germplasm Enhancement, Physiology and Ecology of Food Crops in Cold Region, Department of Agriculture, Northeast Agricultural University, Harbin 150030, China.
Xinhai LiInstitute of Crop Science, Chinese Academy of Agricultural Sciences, Zhongguancun South Street, Haidian District, Beijing 100081, China.
Zhenhua WangKey Laboratory of Germplasm Enhancement, Physiology and Ecology of Food Crops in Cold Region, Department of Agriculture, Northeast Agricultural University, Harbin 150030, China.ORCID 0000-0002-7980-1825
Northeast Agricultural University · CNChinese Academy of Agricultural Sciences · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rice black-streaked dwarf virus (RBSDV) causes maize rough dwarf disease (MRDD), which is a viral disease that significantly affects maize yields worldwide. Plants tolerate stress through transcriptional reprogramming at the alternative splicing (AS), transcriptional, and fusion gene (FG) levels. However, it is unclear whether and how AS and FG interfere with transcriptional reprogramming in MRDD. In this study, we performed global profiling of AS and FG on maize response to RBSDV and compared it with transcriptional changes. There are approximately 1.43 to 2.25 AS events per gene in maize infected with RBSDV.

Indexed as

ReoviridaeZea maysAlternative SplicingGene FusionPlant DiseasesPlant Virusesalternative splicingdifferentially expressed genesfusion generough dwarf diseasevirus stressZea mays L.

Identifiers

PMID35328010
PMCPMC8955601
OpenAlexW4214855566

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.