Evidence map›Paper›PMID 35327952›Full record

ArticleGenes2022

Loss of Heterozygosity in the Tumor DNA of De Novo Diagnosed Patients Is Associated with Poor Outcome for B-ALL but Not for T-ALL.

Natalya Risinskaya, Yana Kozhevnikova, Olga Gavrilina, Julia Chabaeva, Ekaterina Kotova, Anna Yushkova, Galina Isinova, Ksenija Zarubina, Tatiana Obukhova, Sergey Kulikov and 3 more

Open access · goldAbstract read
In one paragraph

Article in Genes, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

  1. International journal of molecular sciences · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 1 country.

Natalya RisinskayaNational Research Center for Hematology, Novy Zykovski Lane, 4a, 125167 Moscow, Russia.ORCID 0000-0003-2957-1619
Yana KozhevnikovaSchool of Medicine, Lomonosov Moscow State University, 27-1, Lomonosovsky Prospect, 119991 Moscow, Russia.ORCID 0000-0003-4010-6283
Olga GavrilinaNational Research Center for Hematology, Novy Zykovski Lane, 4a, 125167 Moscow, Russia.
Julia ChabaevaNational Research Center for Hematology, Novy Zykovski Lane, 4a, 125167 Moscow, Russia.
Ekaterina KotovaNational Research Center for Hematology, Novy Zykovski Lane, 4a, 125167 Moscow, Russia.ORCID 0000-0002-7968-1923
Anna YushkovaNational Research Center for Hematology, Novy Zykovski Lane, 4a, 125167 Moscow, Russia.
Galina IsinovaNational Research Center for Hematology, Novy Zykovski Lane, 4a, 125167 Moscow, Russia.
Ksenija ZarubinaNational Research Center for Hematology, Novy Zykovski Lane, 4a, 125167 Moscow, Russia.ORCID 0000-0003-2947-6398
Tatiana ObukhovaNational Research Center for Hematology, Novy Zykovski Lane, 4a, 125167 Moscow, Russia.
Sergey KulikovNational Research Center for Hematology, Novy Zykovski Lane, 4a, 125167 Moscow, Russia.
Hunan JulhakyanNational Research Center for Hematology, Novy Zykovski Lane, 4a, 125167 Moscow, Russia.ORCID 0000-0002-5522-7531
Andrey SudarikovNational Research Center for Hematology, Novy Zykovski Lane, 4a, 125167 Moscow, Russia.ORCID 0000-0001-9463-9187
Elena ParovichnikovaNational Research Center for Hematology, Novy Zykovski Lane, 4a, 125167 Moscow, Russia.
National Medical Research Center for Hematology · RULomonosov Moscow State University · RU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Despite the introduction of new technologies in molecular diagnostics, one should not underestimate the traditional routine methods for studying tumor DNA. Here we present the evidence that short tandem repeat (STR) profiling of tumor DNA relative to DNA from healthy cells might identify chromosomal aberrations affecting therapy outcome. Tumor STR profiles of 87 adult patients with de novo Ph-negative ALL (40 B-ALL, 43 T-ALL, 4 mixed phenotype acute leukemia (MPAL)) treated according to the "RALL-2016" regimen were analyzed. DNA of tumor cells was isolated from patient bone marrow samples taken at diagnosis. Control DNA samples were taken from the buccal swab or the blood of patients in complete remission. Overall survival (OS) analysis was used to assess the independent impact of the LOH as a risk factor. Of the 87 patients, 21 were found with LOH in various STR loci (24%). For B-ALL patients, LOH (except 12p LOH) was an independent risk factor (OS hazard ratio 3.89, log-rank

Indexed as

Precursor Cell Lymphoblastic Leukemia-LymphomaPrecursor T-Cell Lymphoblastic Leukemia-LymphomaChromosome AberrationsDNA, NeoplasmHumansLoss of HeterozygosityDNA, Neoplasmacute lymphoblastic leukemiachromosomal microarray (CMA)loss of heterozygosity (LOH)short tandem repeat (STR)uniparental disomy (UPD)

Identifiers

PMID35327952
PMCPMC8952291
OpenAlexW4213264748

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.