Evidence map›Paper›PMID 35327526›Full record

ReviewBiomedicines2022

A Bioinformatics-Assisted Review on Iron Metabolism and Immune System to Identify Potential Biomarkers of Exercise Stress-Induced Immunosuppression.

Diego A Bonilla, Yurany Moreno, Jorge L Petro, Diego A Forero, Salvador Vargas-Molina, Adrián Odriozola-Martínez, Carlos A Orozco, Jeffrey R Stout, Eric S Rawson, Richard B Kreider

Open access · goldAbstract readReview
In one paragraph

Review in Biomedicines, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 4 pooled it
3.4field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 4 syntheses or guidelines pooled it, 21 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
  3. Pooled it
  4. Pooled it
  5. Review
  6. Review
  7. Evaluation of protein's interaction and the regulatory network of some drought-responsive genes in Canola under drought and re-watering conditions.Physiology and molecular biology of plants : an international journal of functional plant biology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 7 institutions in 3 countries.

Diego A BonillaResearch Division, Dynamical Business & Science Society-DBSS International SAS, Bogota 110311, Colombia.ORCID 0000-0002-2634-1220
Yurany MorenoResearch Division, Dynamical Business & Science Society-DBSS International SAS, Bogota 110311, Colombia.
Jorge L PetroResearch Division, Dynamical Business & Science Society-DBSS International SAS, Bogota 110311, Colombia.ORCID 0000-0001-5678-1000
Diego A ForeroHealth and Sport Sciences Research Group, School of Health and Sport Sciences, Fundación Universitaria del Área Andina, Bogotá 111221, Colombia.ORCID 0000-0001-9175-3363
Salvador Vargas-MolinaFaculty of Sport Sciences, EADE-University of Wales Trinity Saint David, 29018 Málaga, Spain.
Adrián Odriozola-MartínezSport Genomics Research Group, Department of Genetics, Physical Anthropology and Animal Physiology, Faculty of Science and Technology, University of the Basque Country (UPV/EHU), 48940 Leioa, Spain.
Carlos A OrozcoHealth and Sport Sciences Research Group, School of Health and Sport Sciences, Fundación Universitaria del Área Andina, Bogotá 111221, Colombia.
Jeffrey R StoutPhysiology of Work and Exercise Response (POWER) Laboratory, Institute of Exercise Physiology and Rehabilitation Science, University of Central Florida, Orlando, FL 32816, USA.ORCID 0000-0001-6114-1649
Eric S RawsonDepartment of Health, Nutrition and Exercise Science, Messiah University, Mechanicsburg, PA 17055, USA.
Richard B KreiderExercise & Sport Nutrition Laboratory, Human Clinical Research Facility, Department of Health & Kinesiology, Texas A&M University, College Station, TX 77843, USA.ORCID 0000-0002-3906-1658
Fundación Universitaria del Área Andina · COUniversity of the Basque Country · ESMessiah University · USTexas A&M University · USUniversidad Distrital Francisco José de Caldas · COUniversity of Central Florida · USUniversity of Córdoba · CO

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The immune function is closely related to iron (Fe) homeostasis and allostasis. The aim of this bioinformatics-assisted review was twofold; (i) to update the current knowledge of Fe metabolism and its relationship to the immune system, and (ii) to perform a prediction analysis of regulatory network hubs that might serve as potential biomarkers during stress-induced immunosuppression. Several literature and bioinformatics databases/repositories were utilized to review Fe metabolism and complement the molecular description of prioritized proteins. The Search Tool for the Retrieval of Interacting Genes (STRING) was used to build a protein-protein interactions network for subsequent network topology analysis. Importantly, Fe is a sensitive double-edged sword where two extremes of its nutritional status may have harmful effects on innate and adaptive immunity. We identified clearly connected important hubs that belong to two clusters: (i) presentation of peptide antigens to the immune system with the involvement of redox reactions of Fe, heme, and Fe trafficking/transport; and (ii) ubiquitination, endocytosis, and degradation processes of proteins related to Fe metabolism in immune cells (e.g., macrophages). The identified potential biomarkers were in agreement with the current experimental evidence, are included in several immunological/biomarkers databases, and/or are emerging genetic markers for different stressful conditions. Although further validation is warranted, this hybrid method (human-machine collaboration) to extract meaningful biological applications using available data in literature and bioinformatics tools should be highlighted.

Indexed as

allostasisexerciseferritinshemeproteinsimmune systemmetabolic networks and pathwaysphysiological stress responsetransferrin receptor

Identifiers

PMID35327526
PMCPMC8945881
OpenAlexW4221130730

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.