Evidence map›Paper›PMID 35325312›Full record

ArticleWorld journal of microbiology & biotechnology2022

Metagenomics study to compare the taxonomic composition and metabolism of a lignocellulolytic microbial consortium cultured in different carbon conditions.

Qinggeer Borjigin, Bizhou Zhang, Xiaofang Yu, Julin Gao, Xin Zhang, Jiawei Qu, Daling Ma, Shuping Hu, Shengcai Han

Abstract read
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In one paragraph

Article in World journal of microbiology & biotechnology, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Tibetan Tea DrivesFoods (Basel, Switzerland) · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Qinggeer BorjiginAgricultural College, Inner Mongolia Agricultural University, No. 275, XinJian East Street, Hohhot, 010019, China.ORCID http://orcid.org/0000-0002-7071-1006
Bizhou ZhangSpecial Crops Institute, Inner Mongolia Academy of Agricultural & Animal Husbandry Sciences, No.22, ZhaoJun Road, Hohhot, 010031, China.
Xiaofang YuAgricultural College, Inner Mongolia Agricultural University, No. 275, XinJian East Street, Hohhot, 010019, China. yuxiaofang75@163.com.
Julin GaoAgricultural College, Inner Mongolia Agricultural University, No. 275, XinJian East Street, Hohhot, 010019, China. nmgaojulin@163.com.
Xin ZhangAgricultural College, Inner Mongolia Agricultural University, No. 275, XinJian East Street, Hohhot, 010019, China.
Jiawei QuAgricultural College, Inner Mongolia Agricultural University, No. 275, XinJian East Street, Hohhot, 010019, China.
Daling MaAgricultural College, Inner Mongolia Agricultural University, No. 275, XinJian East Street, Hohhot, 010019, China.
Shuping HuKey Laboratory of Crop Cultivation and Genetic Improvement in Inner Mongolia Autonomous Region, No. 275, XinJian East Street, Hohhot, 010019, China.
Shengcai HanKey Laboratory of Crop Cultivation and Genetic Improvement in Inner Mongolia Autonomous Region, No. 275, XinJian East Street, Hohhot, 010019, China.

Funding

Earmarked Fund for China Agriculture Research System CARS-02-63Innovative Research Group Project of the National Natural Science Foundation of China 25204120National Natural Science Foundation of China 31760353National Natural Science Foundation of China 32060434Natural Science Foundation of Inner Mongolia 2018ZD02Natural Science Foundation of Inner Mongolia 2020MS03086
6 · The paper itself

Abstract

A lignocellulolytic microbial consortium holds promise for the in situ biodegradation of crop straw and the comprehensive and effective utilization of agricultural waste. In this study, we applied metagenomics technology to comprehensively explore the metabolic functional potential and taxonomic diversity of the microbial consortia CS (cultured on corn stover) and FP (cultured on filter paper). Analyses of the data on metagenomics taxonomic affiliations revealed considerable differences in the taxonomic composition and carbohydrate-active enzymes profile of the microbial consortia CS and FP. Pseudomonas, Dysgonomonas and Sphingobacterium in CS and Cellvibrio and Pseudomonas in FP had a much wider distribution of lignocellulose degradative ability. The genes for more lignocellulose degradative enzymes were detected when the relatively simple substrate filter paper was used as the carbon source. Clusters of Orthologous Groups (COG) and Kyoto Encyclopedia of Genes and Genomes (KEGG) annotation analyses revealed considerable levels of similarity, and carbohydrate metabolic and amino acid metabolic pathways were the most enriched in CS and FP, respectively. The mechanism used by the two microbial consortia to degrade lignocellulose was similar, but the annotation of quantity of genes indicated that they are diverse and vary greatly. These data underlie the interactions between microorganisms and the synergism of enzymes during the degradative process of lignocellulose under different substrates and suggest the development of potential microbial resources.

Indexed as

Microbial ConsortiaSphingobacteriumBacteriaCarbonMetagenomicsCarbonFunctional potentialsMetagenomicsMicrobial consortiumTaxonomic composition

Identifiers

PMID35325312

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.