Evidence map›Paper›PMID 35320529›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2022

Method for Identifying Galectin Ligands on Lymphocyte Membrane Glycoproteins.

Kashyap R Patel, Adam W Barb, Sean R Stowell

Abstract read
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Kashyap R PatelJoint Program in Transfusion Medicine, Department of Pathology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA.
Adam W BarbDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, GA, USA.
Sean R StowellJoint Program in Transfusion Medicine, Department of Pathology, Brigham and Women's Hospital, Harvard Medical School, Boston, MA, USA. srstowell@bwh.harvard.edu.

Funding

TRANSFUSION BIOLOGY AND MEDICINET32HL066987 · NHLBI · CHILDREN'S HOSPITAL BOSTON · PI JOHN P MANIS · 2001 to 2026
$10.2M
Composition and structure of antibody receptors at the surface of primary human cells during immune activationU01AI148114 · NIAID · UNIVERSITY OF GEORGIA · PI BARB, ADAM WESLEY, MACE, EMILY MARGARET · 2020 to 2024
$2.0M
Integrating microbial glycan arrays with genomic sequences to study host microbe interactionsU01CA242109 · NCI · EMORY UNIVERSITY · PI CUMMINGS, RICHARD D, STOWELL, SEAN R · 2019 to 2021
$1.5M
NCI NIH HHS U01 CA242109NHLBI NIH HHS T32 HL066987NIAID NIH HHS U01 AI148114
6 · The paper itself

Abstract

Glycosylation is one of the most common protein posttranslational modifications. Most human lymphocyte membrane receptors are modified by diverse glycan structures, and functional studies have indicated that a family of glycan-binding proteins, galectins, can significantly modulate lymphocyte development and function by interacting with these glycans. Several galectins have a varying degree of affinity for the N-acetyllactosamine (LacNAc) disaccharide, and some critical lymphocyte receptors can be modified by glycan structures carrying this motif. However, the site-specific glycan composition on primary lymphocyte membrane receptors in healthy individuals is largely limited. The main reason for the limitation is low abundance of available material from a single donor and compositional heterogeneity in glycan structures that can potentially modify a protein. Donor-dependent variability in N-glycan structures on CD16a isolated from primary NK cells of healthy human donors was recently reported. NK cell CD16a is glycosylated at five N-glycosylation sites, and two of the five sites are modified, almost exclusively, by N-glycans with multiple LacNAc repeats which can serve as ligands for endogenous galectins. Thus, the protocol described in this section can be utilized to identify galectin ligands at specific glycosylation sites of endogenous membrane receptor from circulating primary human lymphocytes.

Indexed as

GalectinsMembrane GlycoproteinsGlycosylationHumansKiller Cells, NaturalLigandsGalectinsLigandsMembrane GlycoproteinsCD16aGlycoproteomicsMass spectrometryN-acetyllactosamine (LacNAc)Natural killer cellN-glycosylation

Identifiers

PMID35320529
PMCPMC10174696

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.