Evidence map›Paper›PMID 35319985›Full record

ArticleScience advances2022

Temporal control of the integrated stress response by a stochastic molecular switch.

Philipp Klein, Stefan M Kallenberger, Hanna Roth, Karsten Roth, Thi Bach Nga Ly-Hartig, Vera Magg, Janez Aleš, Soheil Rastgou Talemi, Yu Qiang, Steffen Wolf and 11 more

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
5.8field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
  2. The Role of Long Noncoding RNAs in Modulation of Stress Granules in Cancer.Journal of cellular and molecular medicine · 2026
    Review
  3. Article
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  6. Article
  7. Systems Virology at Scale.Current opinion in systems biology · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 2 institutions in 1 country.

Philipp KleinDepartment of Infectious Diseases, Molecular Virology, Center for Integrative Infectious Diseases Research, Heidelberg University, Heidelberg, Germany.ORCID 0000-0003-1671-1969
Stefan M KallenbergerDivision of Theoretical Bioinformatics, German Cancer Research Center (DKFZ), Heidelberg, Germany.ORCID 0000-0003-3783-0246
Hanna RothDepartment of Infectious Diseases, Molecular Virology, Center for Integrative Infectious Diseases Research, Heidelberg University, Heidelberg, Germany.ORCID 0000-0002-9556-310X
Karsten RothDepartment of Infectious Diseases, Molecular Virology, Center for Integrative Infectious Diseases Research, Heidelberg University, Heidelberg, Germany.
Thi Bach Nga Ly-HartigDivision of Biochemistry, Mannheim Institute for Innate Immunoscience (MI3), Medical Faculty Mannheim, Heidelberg University, Mannheim, Germany.
Vera MaggDepartment of Infectious Diseases, Molecular Virology, Center for Integrative Infectious Diseases Research, Heidelberg University, Heidelberg, Germany.
Janez AlešHCI/IWR, Heidelberg University, Heidelberg, Germany.ORCID 0000-0002-7837-0621
Soheil Rastgou TalemiDivision of Theoretical Systems Biology, German Cancer Research Center (DKFZ), Heidelberg, Germany.ORCID 0000-0002-9999-2403
Yu QiangBiomedical Computer Vision Group, BioQuant, IPMB, Heidelberg University, Heidelberg, Germany.ORCID 0000-0002-3783-512X
Steffen WolfHCI/IWR, Heidelberg University, Heidelberg, Germany.ORCID 0000-0002-9639-2509
Olga OleksiukDepartment of Infectious Diseases, Molecular Virology, Center for Integrative Infectious Diseases Research, Heidelberg University, Heidelberg, Germany.
Roma KurilovDivision of Theoretical Bioinformatics, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Barbara Di VenturaDivision of Theoretical Bioinformatics, German Cancer Research Center (DKFZ), Heidelberg, Germany.ORCID 0000-0002-0247-9989
Ralf BartenschlagerDepartment of Infectious Diseases, Molecular Virology, Center for Integrative Infectious Diseases Research, Heidelberg University, Heidelberg, Germany.ORCID 0000-0001-7450-607X
Roland EilsDivision of Theoretical Bioinformatics, German Cancer Research Center (DKFZ), Heidelberg, Germany.ORCID 0000-0002-0034-4036
Karl RohrBiomedical Computer Vision Group, BioQuant, IPMB, Heidelberg University, Heidelberg, Germany.
Fred A HamprechtHCI/IWR, Heidelberg University, Heidelberg, Germany.
Thomas HöferDivision of Theoretical Systems Biology, German Cancer Research Center (DKFZ), Heidelberg, Germany.ORCID 0000-0003-3560-8780
Oliver T FacklerDepartment of Infectious Diseases, Integrative Virology, Center for Integrative Infectious Diseases Research, Heidelberg University, Heidelberg, Germany.ORCID 0000-0003-2982-4209
Georg StoecklinDivision of Biochemistry, Mannheim Institute for Innate Immunoscience (MI3), Medical Faculty Mannheim, Heidelberg University, Mannheim, Germany.ORCID 0000-0001-9284-9834
Alessia RuggieriDepartment of Infectious Diseases, Molecular Virology, Center for Integrative Infectious Diseases Research, Heidelberg University, Heidelberg, Germany.ORCID 0000-0001-9981-3308
Heidelberg University · DEGerman Cancer Research Center · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Stress granules (SGs) are formed in the cytosol as an acute response to environmental cues and activation of the integrated stress response (ISR), a central signaling pathway controlling protein synthesis. Using chronic virus infection as stress model, we previously uncovered a unique temporal control of the ISR resulting in recurrent phases of SG assembly and disassembly. Here, we elucidate the molecular network generating this fluctuating stress response by integrating quantitative experiments with mathematical modeling and find that the ISR operates as a stochastic switch. Key elements controlling this switch are the cooperative activation of the stress-sensing kinase PKR, the ultrasensitive response of SG formation to the phosphorylation of the translation initiation factor eIF2α, and negative feedback via GADD34, a stress-induced subunit of protein phosphatase 1. We identify GADD34 messenger RNA levels as the molecular memory of the ISR that plays a central role in cell adaptation to acute and chronic stress.

Identifiers

PMID35319985
PMCPMC8942376
OpenAlexW4220884191

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.