Evidence map›Paper›PMID 35319020›Full record

ArticleThe ISME journal2022

Novel indole-mediated potassium ion import system confers a survival advantage to the Xanthomonadaceae family.

Yuxiang Zhu, Yong Han, Guanglei Liu, Zeran Bian, Xiayi Yan, Yaoyao Li, Hongan Long, Guanshuo Yu, Yan Wang

Open access · bronzeAbstract read
In one paragraph

Article in The ISME journal, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
5.6field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 17 citations in OpenAlex.

  1. Hijacking competitor-derived signals: RcsB/C drivesApplied and environmental microbiology · 2026
    Article
  2. Article
  3. Mechanism ofApplied and environmental microbiology · 2025
    Article
  4. Indole-3-acetic acid (IAA) protectsApplied and environmental microbiology · 2025
    Article
  5. Article
  6. Review
  7. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Yuxiang Zhu *College of Marine Life Sciences, and Institute of Evolution & Marine Biodiversity, Ocean University of China, Qingdao, 266003, China.ORCID http://orcid.org/0000-0003-3938-4235
Yong Han *Edison Biotechnology Institute, Ohio University, Athens, OH, 45701, USA.
Guanglei Liu *College of Marine Life Sciences, and Institute of Evolution & Marine Biodiversity, Ocean University of China, Qingdao, 266003, China.
Zeran BianCollege of Marine Life Sciences, and Institute of Evolution & Marine Biodiversity, Ocean University of China, Qingdao, 266003, China.ORCID http://orcid.org/0000-0001-9111-6241
Xiayi YanCollege of Marine Life Sciences, and Institute of Evolution & Marine Biodiversity, Ocean University of China, Qingdao, 266003, China.ORCID http://orcid.org/0000-0002-2858-7566
Yaoyao LiKey Laboratory of Chemical Biology, School of Pharmaceutical Sciences, Shandong University, Jinan, 250100, China.ORCID http://orcid.org/0000-0002-8762-9615
Hongan LongCollege of Marine Life Sciences, and Institute of Evolution & Marine Biodiversity, Ocean University of China, Qingdao, 266003, China.
Guanshuo YuCollege of Marine Life Sciences, and Institute of Evolution & Marine Biodiversity, Ocean University of China, Qingdao, 266003, China.
Yan WangCollege of Marine Life Sciences, and Institute of Evolution & Marine Biodiversity, Ocean University of China, Qingdao, 266003, China. wangy12@ouc.edu.cn.ORCID http://orcid.org/0000-0003-4632-5786
Ocean University of China · CNQingdao National Laboratory for Marine Science and Technology · CNBiotechnology Institute · USShandong University · CN

Funding

National Natural Science Foundation of China (National Science Foundation of China) 31870023National Natural Science Foundation of China (National Science Foundation of China) 42176108
6 · The paper itself

Abstract

Interspecific and intraspecific communication systems of microorganisms are involved in the regulation of various stress responses in microbial communities. Although the significance of signaling molecules in the ubiquitous family Xanthomonadaceae has been reported, the role bacterial communications play and their internal mechanisms are largely unknown. Here, we use Lysobacter enzymogenes, a member of Xanthomonadaceae, to identify a novel potassium ion import system, LeKdpXFABC. This import system participates in the indole-mediated interspecies signaling pathway and matters in environmental adaptation. Compared with the previously reported kdpFABC of Escherichia coli, LekdpXFABC contains a novel indispensable gene LekdpX and is directly regulated by the indole-related two-component system QseC/B. QseC autophosphorylation is involved in this process. The operon LekdpXFABC widely exists in Xanthomonadaceae. Moreover, indole promotes antimicrobial product production at the early exponential phase. Further analyses show that indole enhances potassium ion adsorption on the cell surface by upregulating the production of O-antigenic polysaccharides. Finally, we confirm that LeKdpXFABC mediation by indole is subject to the intraspecific signaling molecules DSFs, of which the biosynthesis genes always exist together with LekdpXFABC. Therefore, as a new idea, the signal collaborative strategy of indole and DSFs might ensure the persistent fitness advantage of Xanthomonadaceae in variable environments.

Indexed as

XanthomonadaceaeAnti-Bacterial AgentsEscherichia coliGene Expression Regulation, BacterialIndolesPotassiumAnti-Bacterial AgentsIndolesPotassium

Identifiers

PMID35319020
PMCPMC9213462
OpenAlexW4221101134

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.