Evidence map›Paper›PMID 35318918›Full record

ReviewEmerging infectious diseases2022

Phylogenetic Analysis of Spread of Hepatitis C Virus Identified during HIV Outbreak Investigation, Unnao, India.

Arati Mane, Sunitha Manjari Kasibhatla, Pallavi Vidhate, Vandana Saxena, Sandip Patil, Amrita Rao, Amit Nirmalkar, Urmila Kulkarni-Kale, Samiran Panda

Abstract readReview
In one paragraph

Review in Emerging infectious diseases, 2022. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Arati Mane
Sunitha Manjari Kasibhatla
Pallavi Vidhate
Vandana Saxena
Sandip Patil
Amrita Rao
Amit Nirmalkar
Urmila Kulkarni-Kale
Samiran Panda

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

An HIV outbreak investigation during 2017-2018 in Unnao District, Uttar Pradesh, India, unearthed high prevalence of hepatitis C virus (HCV) antibodies among the study participants. We investigated these HCV infections by analyzing NS5B and core regions. We observed no correlation between HIV-HCV viral loads and clustering of HCV sequences, regardless of HIV serostatus. All HCV isolates belonged to genotype 3a. Monophyletic clustering of isolates in NS5B phylogeny indicates emergence of the outbreak from a single isolate or its closely related descendants. The nucleotide substitution rate for NS5B was 6 × 10

Indexed as

Hepatitis CHIV InfectionsDisease OutbreaksHepacivirusHumansIndiaPhylogenycore sequencingdual outbreakgeneral communityhepatitis CHIV/AIDSIndiaNS5Bphylogenetic analysisUnnaoviruses

Identifiers

PMID35318918
PMCPMC8962895

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.